Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0200
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    24   1.0  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    24   1.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.1  

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 135 RKSVRQSLAQWFDFQTIQHG 194
           R+  R+ +AQW +  T QHG
Sbjct: 37  RQWTREHVAQWINLVTQQHG 56


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 135 RKSVRQSLAQWFDFQTIQHG 194
           R+  R+ +AQW +  T QHG
Sbjct: 37  RQWTREHVAQWINLVTQQHG 56


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 31  TNHSCVQQVHRLTEHILV 84
           TN+S VQ++HR    I V
Sbjct: 238 TNYSAVQEMHRKGHEIAV 255


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 31  TNHSCVQQVHRLTEHILV 84
           TN+S VQ +HR    I V
Sbjct: 230 TNYSAVQDLHRRGHEIAV 247


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 31  TNHSCVQQVHRLTEHILV 84
           TN+S VQ +HR    I V
Sbjct: 237 TNYSAVQDLHRRGHEIAV 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,286
Number of Sequences: 336
Number of extensions: 3781
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)