Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0200
(684 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.2
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 23 2.7
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 3.6
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 3.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 6.3
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 139 KAFDKVWHNGLIFRLFNMG 195
KA+ KV N +IF ++ MG
Sbjct: 1542 KAYQKVEENEIIFEIYKMG 1560
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 221 YGTSCRTALFDIESREPAPPHD 286
+GT + FD +S++ PP+D
Sbjct: 338 FGTPRIMSSFDFQSKDQGPPND 359
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.6 bits (46), Expect = 3.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 176 SDYSTWACRIVSCSSYGTSCRTALFDIESR 265
SDY C IVSCS T + D+ R
Sbjct: 352 SDYQDAFCNIVSCSPQTVHPET-IIDVSRR 380
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 159 PDFVERFCDVEEESSRV*RFW 97
PD R DV EE + +FW
Sbjct: 199 PDLNYRNSDVREEMKNIMKFW 219
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 216 EHETIRHAHVE*SENQT 166
EH T+ ++E SEN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 216 EHETIRHAHVE*SENQT 166
EH T+ ++E SEN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 216 EHETIRHAHVE*SENQT 166
EH T+ ++E SEN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 216 EHETIRHAHVE*SENQT 166
EH T+ ++E SEN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 216 EHETIRHAHVE*SENQT 166
EH T+ ++E SEN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 216 EHETIRHAHVE*SENQT 166
EH T+ ++E SEN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 216 EHETIRHAHVE*SENQT 166
EH T+ ++E SEN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 216 EHETIRHAHVE*SENQT 166
EH T+ ++E SEN+T
Sbjct: 188 EHRTVLAVNIEKSENET 204
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 465 SPRTVVPKMAHRHQPSEKYCGAISEG 542
S RT VP++A E Y G + G
Sbjct: 1336 SRRTPVPRLAQDSSEDESYRGPSASG 1361
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,813
Number of Sequences: 438
Number of extensions: 4457
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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