Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0196
(778 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 283 1e-76
SB_54147| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 70 2e-12
SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05) 58 6e-09
SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_37965| Best HMM Match : TIR (HMM E-Value=3.3) 43 3e-04
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 41 0.001
SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_36771| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4) 33 0.20
SB_30399| Best HMM Match : ERM (HMM E-Value=0.37) 33 0.34
SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_59319| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 30 1.8
SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_57181| Best HMM Match : bZIP_1 (HMM E-Value=0.19) 29 4.2
SB_47661| Best HMM Match : zf-CCHC (HMM E-Value=0.015) 29 4.2
SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_27444| Best HMM Match : Phage_integrase (HMM E-Value=0.0013) 29 5.5
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_13397| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_11721| Best HMM Match : Peptidase_C12 (HMM E-Value=0) 28 7.3
SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23) 28 9.7
SB_23785| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_23564| Best HMM Match : zf-CCHC (HMM E-Value=0.015) 28 9.7
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 28 9.7
SB_51861| Best HMM Match : RVT_1 (HMM E-Value=1.2e-10) 28 9.7
SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 9.7
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 283 bits (693), Expect = 1e-76
Identities = 148/257 (57%), Positives = 172/257 (66%), Gaps = 1/257 (0%)
Frame = +3
Query: 9 KEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNV 188
K++ENA ILIANTPMD DKIKVFGS ++VDS AKIA+LE+AEK+KMK+KV I+ H N
Sbjct: 227 KKIENAKILIANTPMDADKIKVFGSRVRVDSTAKIADLEMAEKQKMKEKVEMIIKHDINC 286
Query: 189 FINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLI 368
FINRQLIYNYPEQLFADAGVMAIEHADFEG+ERL LVTGGEIVSTF PD VKLG CK I
Sbjct: 287 FINRQLIYNYPEQLFADAGVMAIEHADFEGVERLALVTGGEIVSTFGRPDLVKLGTCKKI 346
Query: 369 EEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKSYVE 548
EEV+IG++ LI FSG AL ACT+VIRGATQQ++DEAERSLHDALCVL T KE K+
Sbjct: 347 EEVMIGEDKLIHFSGCALNEACTVVIRGATQQILDEAERSLHDALCVLNQTGKENKTVNG 406
Query: 549 EGLVKC*WQKQLPXXXXXXXXXXXXXXXXXXXXLRRLPSAVAAMLA-TTVXXXXXXXXXX 725
G + + LR+LP+ +A +
Sbjct: 407 GGASEVLMAHAVSQLAAKTPGKEAAAMESFATALRQLPTIIADNAGYDSADLVAKLRAAH 466
Query: 726 XXXXXHYGIRYPNGTVG 776
YG+ NGTVG
Sbjct: 467 TQGKNTYGLNMVNGTVG 483
Score = 37.1 bits (82), Expect = 0.016
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +2
Query: 677 NAGYDSADLIARLKAHHSRGETLW 748
NAGYDSADL+A+L+A H++G+ +
Sbjct: 450 NAGYDSADLVAKLRAAHTQGKNTY 473
>SB_54147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +3
Query: 9 KEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNV 188
K++ENA ILIANTPMD DK+KVFGS ++VDS AKIAELE AEK+KMKDKV I+ H N
Sbjct: 11 KKIENAKILIANTPMDADKVKVFGSRVRVDSTAKIAELEKAEKQKMKDKVEMIIKHGINC 70
Query: 189 FIN 197
F+N
Sbjct: 71 FVN 73
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 70.1 bits (164), Expect = 2e-12
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
Frame = +3
Query: 9 KEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNV 188
K V++A I I P + K K + V ++ +L+ E+EK + + ++ N+
Sbjct: 239 KVVKDAKIAILTCPFEPPKPKT-KHKLDVATVEDYKKLQEYEREKFTEMIKQVKDTGANL 297
Query: 189 FINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLI 368
I + + L + A+ IE + + TGG IV F KLG ++
Sbjct: 298 AICQWGFDDEANHLLLQNHLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGKAGIV 357
Query: 369 EEVLIGD--ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 536
E+ G + ++ A TI IRG + ++ EA+RS+HDALCV+ V++ +
Sbjct: 358 RELSFGTTKDKMLVIEECHNSRAVTIFIRGGNKMIVGEAKRSIHDALCVVRNLVRDSR 415
>SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 62.5 bits (145), Expect = 4e-10
Identities = 29/96 (30%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +3
Query: 246 VMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVAL- 422
++ + + + IE + G + +++ D + L +L+EEV +G +++ +GV+
Sbjct: 3 ILVVRDIERDEIEFICKSIGCKPIASLDHFNPDMLASAELVEEVSVGTSKVVKITGVSNP 62
Query: 423 GSACTIVIRGATQQVIDEAERSLHDALCVLAATVKE 530
G+ ++++RG+ + V++EA+RSLHDALCV+ VK+
Sbjct: 63 GNTVSVLVRGSNKLVLEEADRSLHDALCVIRCLVKK 98
>SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05)
Length = 206
Score = 58.4 bits (135), Expect = 6e-09
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +3
Query: 279 IERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD--ESLIRFSGVALGSACTIVIRG 452
IE + + TGG IV F KLG ++ E+ G + ++ A TI IRG
Sbjct: 43 IELIAIATGGRIVPRFSELTSEKLGKAGIVRELSFGTTKDKMLVIEECHNSRAVTIFIRG 102
Query: 453 ATQQVIDEAERSLHDALCVLAATVKEPK 536
+ ++ EA+RS+HDALCV+ V++ +
Sbjct: 103 GNKMIVGEAKRSIHDALCVVRNLVRDSR 130
>SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 50.4 bits (115), Expect = 2e-06
Identities = 33/174 (18%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Frame = +3
Query: 18 ENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFIN 197
++ I + + P+D + + G T+ + + ++ E++ ++ ++ I +V ++
Sbjct: 89 KDCKIAVFSCPLDLMQTETKG-TVLIKNAEELKSFSKGEEDLLEMQIKSIKEKGADVIVS 147
Query: 198 RQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEV 377
+ + +M + + RL + +P LGHC L+
Sbjct: 148 GGKVADMALHFCNKYQIMVVRLTSKWDLRRLCRAISATALPKVTTPTTEDLGHCDLVYLS 207
Query: 378 LIGDESLIRFSGVALGSA-CTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 536
IG+ + F +A T+VIRG+T+ ++D+ ER++ D + A ++P+
Sbjct: 208 EIGETPVTIFKQEREETAVATVVIRGSTENIMDDIERAIDDGVNSFKALTRDPR 261
>SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3
Query: 405 FSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKSYVEEGLVKC*WQKQL 584
FSG + CTI++RG +Q ++E ERSLHDA+ ++ +K G ++ K L
Sbjct: 5 FSGCKQSTTCTIIMRGGAEQFMEETERSLHDAIMIVRRAMKNDAVVAGGGAIEMELSKYL 64
>SB_37965| Best HMM Match : TIR (HMM E-Value=3.3)
Length = 189
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +3
Query: 426 SACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKSYVEEG 554
S+ +I++RGA ++DE ERS+HDA+CV+ V E K+ V G
Sbjct: 6 SSSSIILRGANDYMLDEMERSMHDAICVV-KRVLESKTLVPGG 47
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 677 NAGYDSADLIARLKAHHSRGE 739
NA DSADL+A+L+A H+ +
Sbjct: 90 NAAKDSADLVAKLRAFHNTSQ 110
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/133 (19%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Frame = +3
Query: 102 MAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGI 281
+A + L + E+ +K+ V+++ A + NV + + + +++ G+ + I
Sbjct: 625 LASLDPLVLQERNFLKNFVSRVAALRPNVLLVEKTVSRLAQEMLLQHGISLALNVKPAVI 684
Query: 282 ERLGLVTGGEIVSTFDSPDKVKLGHCKLIE----EVLIGD-ESLIRFSGVALGSACTIVI 446
ER+ T E + + + + +LG C+L ++ G+ ++L+ G CT+ +
Sbjct: 685 ERVSRCTKAETLRSMEQLSRPRLGSCQLFRVQNFKLKNGETKTLMYLEGCPTELGCTVTL 744
Query: 447 RGATQQVIDEAER 485
RG V+ + ++
Sbjct: 745 RGGNSFVLTKIKK 757
>SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 546
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 429 ACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 536
ACTI++RGA++ V++E ER+L DA+ V + +P+
Sbjct: 160 ACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPR 195
>SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 429 ACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 536
ACTI++RGA++ V++E ER+L DA+ V + +P+
Sbjct: 217 ACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPR 252
>SB_36771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 37.1 bits (82), Expect = 0.016
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +2
Query: 677 NAGYDSADLIARLKAHHSRGETLW 748
NAGYDSADL+A+L+A H++G+ +
Sbjct: 8 NAGYDSADLVAKLRAAHTQGKNTY 31
>SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4)
Length = 101
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +3
Query: 132 EKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGE 311
E + K+++ KILA NV ++ I + + F + G MA+ ++R+ TG
Sbjct: 2 ESDITKERIQKILASGANVVLSTGGIDDLCLKYFVECGAMAVRRVKKGDLKRIARSTGAT 61
Query: 312 IVSTF------DSPDKVKLGHCKLIEEVLIGDESLI 401
+V + +S D LG + + + I D+ LI
Sbjct: 62 MVLSLANLEGEESFDASMLGQAEEVCQQRICDDELI 97
>SB_30399| Best HMM Match : ERM (HMM E-Value=0.37)
Length = 562
Score = 32.7 bits (71), Expect = 0.34
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 63 KIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQ-LIYNYPEQLFAD 239
KI+ F + +VD + + + + E E +VNK++ I R+ L ++P+ + A
Sbjct: 254 KIETFYTQTRVDQLERKIKAKRQENESSAAEVNKLVDQLQRAVIARKPLKADFPKGILAS 313
Query: 240 AGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKL 350
+EH G T G++ + DSP + L
Sbjct: 314 HVKQVLEHHLVNEASGKGGFTTGKVSISVDSPTDLYL 350
>SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 32.3 bits (70), Expect = 0.45
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 222 EQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTF--DSPDKVKLGHCKLIEEVLIGDES 395
++ D V + I + +TG ++STF D P+ G IE +I ++S
Sbjct: 22 KRFLKDRKVYVFDRLSVMHINAVQRLTGATLLSTFTTDIPEHW-YGQLDSIEYTVIANKS 80
Query: 396 LIRFSGVA-LGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEP 533
+ + S CT+++ + ++E + A+ VLA V P
Sbjct: 81 YLHLIPTQPMTSVCTVILCSPDESSLEELLSTCQSAMSVLAQVVAYP 127
>SB_59319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 28
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 72 VFGSTIKVDSMAKIAELEVAEKEKMKDK 155
VFGS ++VDS AKIA +E +K K K
Sbjct: 1 VFGSRVRVDSTAKIAGVESRKKWKRTPK 28
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -1
Query: 442 TIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPS 272
T++Q P +TP +S+P T ++ + +S S+ +S P P +S PS
Sbjct: 368 TLIQYNPVSTPSNTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVSTPSHTPPVSTPS 424
>SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = -1
Query: 469 ITCCVAPRITIVQAEPNATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTI----SPP 302
+T +A + + +A E S+P+ T+S+ TL+ S VDT SP
Sbjct: 157 VTTSLASAPVVTTSLASAPVETTSLASTPVETTSLASTPVDTTLTASSPVDTTLTASSPV 216
Query: 301 VTKPSLSIPSKSACSIAITPASA 233
T P+ S P K+ +A TP A
Sbjct: 217 ETTPTASPPVKTT-PLAATPVYA 238
>SB_57181| Best HMM Match : bZIP_1 (HMM E-Value=0.19)
Length = 104
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 54 DTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLF 233
+T+KI+ +V +IAEL+V EK++ + N+ L + V Y ++
Sbjct: 26 ETEKIRREYEVFRVSKQTEIAELQVL-NEKLQSE-NRRLRGESKVLQATCQKLRYEREMA 83
Query: 234 ADAGVMAIEH-ADFE-GIERL 290
DAG A++ A FE G+ R+
Sbjct: 84 LDAGDQALQRAATFEKGLNRI 104
>SB_47661| Best HMM Match : zf-CCHC (HMM E-Value=0.015)
Length = 830
Score = 29.1 bits (62), Expect = 4.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 701 DQHCRSQHCGDSGRQSPERDCKGFG 627
D+H + +CG++G P +DC+ +G
Sbjct: 255 DRH-KCDYCGETGAHKPGKDCQAYG 278
>SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1787
Score = 29.1 bits (62), Expect = 4.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 701 DQHCRSQHCGDSGRQSPERDCKGFG 627
D+H + +CG++G P +DC+ +G
Sbjct: 78 DRH-KCDYCGETGAHKPGKDCQAYG 101
>SB_27444| Best HMM Match : Phage_integrase (HMM E-Value=0.0013)
Length = 940
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 449 WCHTTSYRRS*AFTP*CALRACCYCKR 529
+C RS +P CA+ ACC+C R
Sbjct: 300 FCFQKESCRSKEVSPPCAVMACCFCNR 326
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = -1
Query: 427 EPNATPE--KRIKLSS-PIRTSSINLQ*-PSFTLSGESNVDTISPPVTKP--SLSIPSKS 266
+P+ TP K + L++ P T+S L+ PS TLS + PP + P S + +
Sbjct: 1054 QPSVTPASTKSVSLTATPATTTSEVLEPSPSLTLSSSEAASSTLPPTSLPVAQSSTSTST 1113
Query: 265 ACSIAITPASA 233
+ A+TP+S+
Sbjct: 1114 VKTAAVTPSSS 1124
>SB_13397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/85 (24%), Positives = 34/85 (40%)
Frame = +3
Query: 48 PMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQ 227
P+ T I+VF I D + KIA+ E+ E K + + H F + + + E
Sbjct: 399 PILTKLIRVFRRQILEDDLDKIAKTEIHEDSKFMEAIELFTHHARAQFQSLVELRHQAEL 458
Query: 228 LFADAGVMAIEHADFEGIERLGLVT 302
FA E + GL++
Sbjct: 459 SFATTLEYFGEETSISSAQFFGLIS 483
>SB_11721| Best HMM Match : Peptidase_C12 (HMM E-Value=0)
Length = 537
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -1
Query: 418 ATPEKRIKLSSPIRTSSINLQ*PSFTLSGESNVDTISPPVTKPSLSIPSKSACSIAITPA 239
A+P + +S SS ++Q S ++ + PP P + P S ++AIT A
Sbjct: 229 ASPSPATQTTSSPTNSSTSVQVQPLETSKDNAKQLMPPPPPPPRATPPPVSIATVAITTA 288
Query: 238 SA 233
+A
Sbjct: 289 AA 290
>SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23)
Length = 1268
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 701 DQHCRSQHCGDSGRQSPERDCKGFG 627
D+H + +CG +G P +DC+ +G
Sbjct: 164 DRH-KCDYCGKTGAHKPGKDCQAYG 187
>SB_23785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 872
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 701 DQHCRSQHCGDSGRQSPERDCKGFG 627
D+H + +CG +G P +DC+ +G
Sbjct: 34 DRH-KCDYCGKTGAHKPGKDCQAYG 57
>SB_23564| Best HMM Match : zf-CCHC (HMM E-Value=0.015)
Length = 667
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 701 DQHCRSQHCGDSGRQSPERDCKGFG 627
D+H + +CG +G P +DC+ +G
Sbjct: 226 DRH-KCDYCGKTGAHKPGKDCQAYG 249
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 644 RAPETAVRCRRNAGYDSADLIARLKAHHSR 733
R E ++R + A ++ A+LI R+K+ H R
Sbjct: 166 RKAEESLRLKTAADFEKAELIRRMKSEHER 195
>SB_51861| Best HMM Match : RVT_1 (HMM E-Value=1.2e-10)
Length = 1318
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 701 DQHCRSQHCGDSGRQSPERDCKGFG 627
D+H + +CG +G P +DC+ +G
Sbjct: 503 DRH-KCDYCGKTGAHKPGKDCQAYG 526
>SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 587
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -3
Query: 695 HCRSQHCGDSGRQSPERDCKGFGCC--GFLSRLCER 594
+CR C G SP+ D G C GF R C+R
Sbjct: 383 NCRKCECSPVGSVSPDCDVTGHCTCTRGFGGRKCDR 418
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,747,930
Number of Sequences: 59808
Number of extensions: 401485
Number of successful extensions: 1070
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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