Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0196
(778 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 281 4e-76
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 87 1e-17
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 83 3e-16
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 82 5e-16
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 71 9e-13
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 71 9e-13
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 64 1e-10
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 63 2e-10
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 56 3e-08
At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kina... 48 9e-06
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 40 0.002
At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina... 38 0.010
At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kina... 36 0.023
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 30 1.5
At4g20070.1 68417.m02936 peptidase M20/M25/M40 family protein co... 29 3.4
At1g19700.1 68414.m02457 homeobox-leucine zipper family protein ... 29 3.4
At5g48300.1 68418.m05966 glucose-1-phosphate adenylyltransferase... 28 6.0
At3g63150.1 68416.m07092 GTP-binding protein-related low similar... 28 6.0
At1g05800.1 68414.m00606 lipase class 3 family protein similar t... 28 6.0
At5g56500.1 68418.m07051 chaperonin, putative similar to SWISS-P... 28 7.9
At4g08920.1 68417.m01469 cryptochrome 1 apoprotein (CRY1) / flav... 28 7.9
At1g48150.1 68414.m05374 MADS-box protein (AGL74 ) similar to GB... 28 7.9
At1g29450.1 68414.m03603 auxin-responsive protein, putative simi... 28 7.9
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 281 bits (689), Expect = 4e-76
Identities = 124/176 (70%), Positives = 154/176 (87%)
Frame = +3
Query: 9 KEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNV 188
K +ENANIL+ANT MDTDK+K++G+ ++VDSM K+AE+E AEKEKMKDKV KI+ H N
Sbjct: 225 KRIENANILVANTAMDTDKVKIYGARVRVDSMTKVAEIEGAEKEKMKDKVKKIIGHGINC 284
Query: 189 FINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLI 368
F+NRQLIYN+PE+LFADAG++AIEHADFEGIERLGLVTGGEI STFD+P+ VKLGHCKLI
Sbjct: 285 FVNRQLIYNFPEELFADAGILAIEHADFEGIERLGLVTGGEIASTFDNPESVKLGHCKLI 344
Query: 369 EEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 536
EE++IG++ LI FSG +G AC+IV+RGA+ V+DEAERSLHDALCVL+ TV + +
Sbjct: 345 EEIMIGEDKLIHFSGCEMGQACSIVLRGASHHVLDEAERSLHDALCVLSQTVNDTR 400
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/21 (61%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
Frame = +2
Query: 677 NAGYDSADLIARLKA-HHSRG 736
NAG DSA+L+A+L+A HH+ G
Sbjct: 448 NAGLDSAELVAQLRAEHHTEG 468
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 87.0 bits (206), Expect = 1e-17
Identities = 52/173 (30%), Positives = 85/173 (49%)
Frame = +3
Query: 9 KEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNV 188
K+ N IL+ N ++ K + I++ ++ + AE + DK++K + V
Sbjct: 233 KKFLNPKILLLNIELELKSEKE-NAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVESGAKV 291
Query: 189 FINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLI 368
++R I + Q FAD + E + R+ GG + ++ ++ LG C++
Sbjct: 292 VLSRLAIGDLATQYFADRDIFCAGRVAEEDLNRVAAAAGGTVQTSVNNIIDEVLGTCEIF 351
Query: 369 EEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVK 527
EE +G E FSG G TIV+RG Q I+EAERSLHDA+ ++ VK
Sbjct: 352 EEKQVGGERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRAVK 404
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 82.6 bits (195), Expect = 3e-16
Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 7/171 (4%)
Frame = +3
Query: 36 IANTPMDTDKIKV-FGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIY 212
IA + K K+ G + V+ ++ ++ E + K+++ K+L NV + + I
Sbjct: 237 IACLDFNLQKTKMQLGVQVVVNDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGID 296
Query: 213 NYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTF------DSPDKVKLGHCKLIEE 374
+ + F +AG +A+ E + + TG +V+TF ++ D LG + E
Sbjct: 297 DMALKYFVEAGAIAVRRVRKEDMRHVAKATGATLVTTFADMEGEETFDPAHLGSADEVVE 356
Query: 375 VLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVK 527
I D+ +I G SA ++++RGA ++DE ER+LHDALC++ T++
Sbjct: 357 ERIADDDVILIKGTKTSSAVSLILRGANDYMLDEMERALHDALCIVKRTLE 407
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 81.8 bits (193), Expect = 5e-16
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 6/178 (3%)
Frame = +3
Query: 15 VENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVF- 191
VENA I + + K + S + V ++ + E+ + + KI A CNV
Sbjct: 239 VENAKIAVIQFQISPPKTDIEQSIV-VSDYTQMDRILKEERNYILGMIKKIKATGCNVLL 297
Query: 192 ----INRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHC 359
I R + + A A +M I+ + + IE + ++ + KLGH
Sbjct: 298 IQKSILRDAVTDLSLHYLAKAKIMVIKDVERDEIEFVTKTLNCLPIANIEHFRAEKLGHA 357
Query: 360 KLIEEVLIGDESLIRFSGVA-LGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKE 530
L+EE +GD +++ +G+ +G ++++RG+ Q V+DEAERSLHDALCV+ V +
Sbjct: 358 DLVEEASLGDGKILKITGIKDMGRTTSVLVRGSNQLVLDEAERSLHDALCVVRCLVSK 415
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 70.9 bits (166), Expect = 9e-13
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Frame = +3
Query: 9 KEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNV 188
K++E+A+I I P + K K + +D++ K L E++ + V K +
Sbjct: 161 KQIEDAHIAILTCPFEPPKPKT-KHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGATL 219
Query: 189 FINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLI 368
I + + L + A+ +E + + TGG IV F KLG ++
Sbjct: 220 VICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGVV 279
Query: 369 EEVLIGD--ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKSY 542
E G E ++ A A T+ IRG + +I+E +RS+HDALCV ++ KS
Sbjct: 280 REKSFGTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRN-KSI 338
Query: 543 VEEG 554
V G
Sbjct: 339 VYGG 342
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 70.9 bits (166), Expect = 9e-13
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Frame = +3
Query: 9 KEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNV 188
K++E+A+I I P + K K + +D++ K L E++ + V K +
Sbjct: 237 KQIEDAHIAILTCPFEPPKPKT-KHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGATL 295
Query: 189 FINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLI 368
I + + L + A+ +E + + TGG IV F KLG ++
Sbjct: 296 VICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGVV 355
Query: 369 EEVLIGD--ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKSY 542
E G E ++ A A T+ IRG + +I+E +RS+HDALCV ++ KS
Sbjct: 356 REKSFGTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRN-KSI 414
Query: 543 VEEG 554
V G
Sbjct: 415 VYGG 418
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 64.1 bits (149), Expect = 1e-10
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Frame = +3
Query: 9 KEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHK--- 179
+ EN +IL N ++ +K ++ ++ + A + AE+ + ++V KI+ K
Sbjct: 226 RRAENCHILTCNVSLEYEKSEINAGFFYSNAEQREA-MVTAERRSVDERVKKIIELKKKV 284
Query: 180 CN-----VFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKV 344
C V IN++ I L A G++ + A +ERL L GGE V++ D
Sbjct: 285 CGDNDNFVVINQKGIDPPSLDLLAREGIIGLRRAKRRNMERLVLACGGEAVNSVDDLTPE 344
Query: 345 KLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATV 524
LG L+ E ++G+E V ++CTI+I+G I + + ++ D L + T+
Sbjct: 345 SLGWAGLVYEHVLGEEKYTFVEQVKNPNSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTI 404
Query: 525 KE 530
++
Sbjct: 405 ED 406
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 62.9 bits (146), Expect = 2e-10
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Frame = +3
Query: 9 KEVENANILIANTPMDTDKIKV-----FGSTIKVDSMAKIAELEVAEK-EKMKDKVNKIL 170
+ EN +IL N ++ +K ++ + + + ++M V E+ +K+ + NK+
Sbjct: 226 RRAENCHILTCNVSLEYEKSEINAGFFYSNAEQREAMVTAERRSVDERVQKIIELKNKVC 285
Query: 171 AHKCNVFI--NRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKV 344
A N F+ N++ I L A G++A+ A +ERL L GGE V++ D
Sbjct: 286 AGNDNSFVILNQKGIDPPSLDLLAREGIIALRRAKRRNMERLVLACGGEAVNSVDDLTPD 345
Query: 345 KLGHCKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATV 524
LG L+ E ++G+E V +CTI+I+G I + + ++ D L + T+
Sbjct: 346 CLGWAGLVYEHVLGEEKYTFVEQVKNPHSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTL 405
Query: 525 KE 530
++
Sbjct: 406 ED 407
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 55.6 bits (128), Expect = 3e-08
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 4/180 (2%)
Frame = +3
Query: 9 KEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVA---EKEKMKDKVNKILAHK 179
+++ N I++ + P++ K G + + + EV E+E +++ +IL K
Sbjct: 231 RKIVNPRIILLDCPLEYKK----GENQTNAELVREEDWEVLLKLEEEYIENICVQILKFK 286
Query: 180 CNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGH- 356
++ I + + + F+ AGV AI R+ G IV+ D + +G
Sbjct: 287 PDLVITEKGLSDLACHYFSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDIGTG 346
Query: 357 CKLIEEVLIGDESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 536
L E IGD+ ACT+++RG ++ I+E ER+L DA+ V +K PK
Sbjct: 347 AGLFEVKKIGDDFFSFIVDCKEPKACTVLLRGPSKDFINEVERNLQDAMSVARNIIKNPK 406
>At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kinase
family protein low similarity to phosphatidylinositol
3,5-kinase [Candida albicans] GI:14571648; contains Pfam
profile PF01504: Phosphatidylinositol-4-phosphate
5-Kinase
Length = 1648
Score = 47.6 bits (108), Expect = 9e-06
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Frame = +3
Query: 102 MAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGI 281
+A L E E MK + KI + + NV + + +Y +Q + + + + +
Sbjct: 439 LASFNTLLQQENEHMKAIIAKIESLRPNVLLVEKSASSYAQQYLLEKEISLVLNVKRSLL 498
Query: 282 ERLGLVTGGEIVSTFDSPDKVKLGHCKLI--EEVL----IGDES-------LIRFSGVAL 422
+R+ TG + + DS +LGHC+L E VL G++S L+ F G
Sbjct: 499 DRIARCTGAVLCPSLDSISTARLGHCELFRTERVLEQHEAGNQSNRKPSRTLMYFEGCPR 558
Query: 423 GSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKSYVEEG 554
CT+V+RG+ ++ + + + + A+ E +EG
Sbjct: 559 RLGCTVVLRGSCREELKKVKHVIQYAVFAAYHLSLETSFLADEG 602
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/179 (18%), Positives = 72/179 (40%), Gaps = 1/179 (0%)
Frame = +3
Query: 3 STKEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKC 182
S K +E A + + +DT + G T+ + S ++ E+ K+++ + +
Sbjct: 233 SIKRMEKAKVAVFAGGVDTTATETKG-TVLIHSAEQLENYAKTEEAKVEELIKAVAESGA 291
Query: 183 NVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCK 362
V ++ I +M ++ + + R G P LG+
Sbjct: 292 KVIVSGGSIGEMALHFCERYKIMVLKISSKFELRRFCRTAGAVAHLKLSRPSPEDLGYVD 351
Query: 363 LIEEVLIGDESL-IRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPK 536
I IG ++ I + S T+V+RG+T ++D+ ER++ D + A ++ +
Sbjct: 352 SISVEEIGGVTVTIARNEEGGNSISTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSR 410
>At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118: TCP-1/cpn60
chaperonin family
Length = 1756
Score = 37.5 bits (83), Expect = 0.010
Identities = 36/196 (18%), Positives = 78/196 (39%), Gaps = 13/196 (6%)
Frame = +3
Query: 6 TKEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCN 185
T ++E +LI ++ +I + ++ L E + +K V KI +H +
Sbjct: 458 TSKIEKPRLLILGGALEYQRIS--------NQLSSFDTLLQQEMDHLKMAVAKIDSHNPD 509
Query: 186 VFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKL 365
+ + + + + ++ + + + +ER+ TG +IV + D KLG+C L
Sbjct: 510 ILLVEKSVSRFAQEYLLAKDISLVLNIKRSLLERISRCTGAQIVPSIDQLTSPKLGYCDL 569
Query: 366 IE-----EVLIGD--------ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALC 506
E + ++L+ F G CTI+++GA + + + + + +
Sbjct: 570 FHVEKFVETHVSPCQVAKKMAKTLMFFDGCPKPLGCTILLKGAHEDELKKVKHVIQYGVF 629
Query: 507 VLAATVKEPKSYVEEG 554
E +EG
Sbjct: 630 AAYHLALETSFLADEG 645
>At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118:
TCP-1/cpn60 chaperonin family
Length = 1791
Score = 36.3 bits (80), Expect = 0.023
Identities = 25/120 (20%), Positives = 55/120 (45%)
Frame = +3
Query: 3 STKEVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKC 182
STK +E A +LI ++ ++ + ++ L EK+ +K V KI A +
Sbjct: 471 STK-IEKARLLILGGGLEYQRVS--------NQLSSFDTLLQQEKDHLKMAVAKIHAERP 521
Query: 183 NVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCK 362
N+ + + + + ++ + + + ++R+ TG +I+ + D KLG+C+
Sbjct: 522 NILLVEKSVSRFAQEYLLAKDISLVLNIKRPLLDRIARCTGAQIIPSVDHLSSQKLGYCE 581
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = -1
Query: 397 KLSSPIRTSSINLQ*PSFTLSGESNVDTISP-----PVTKPSLSIPSKSACSIAITPASA 233
K S+P +S P+F+ S S+ T +P T+ +L +PS S S A+ P +
Sbjct: 471 KTSTPASSSQPQTTSPAFSFSLPSSTSTTAPATSSATTTQTTLVVPSSSGTSTAVAPVAG 530
Query: 232 N 230
+
Sbjct: 531 S 531
>At4g20070.1 68417.m02936 peptidase M20/M25/M40 family protein
contains similarity to hydantoin utilization protein C
[Pseudomonas sp.] SWISS-PROT:Q01264; contains Pfam
profile PF01546: Peptidase family M20/M25/M40
Length = 525
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3
Query: 345 KLGHCKL-IEEVLIGDESLIRFSGVALGSACTIVIRGATQ-QVIDEAERSLHDAL 503
+LG K +E + DE +RF LGSA I ++ +V D++ S+ DAL
Sbjct: 198 RLGELKRPVEVIAFSDEEGVRFQSTFLGSAALAGIMPVSRLEVTDKSGISVQDAL 252
>At1g19700.1 68414.m02457 homeobox-leucine zipper family protein
similar to BEL1-like homeodomain 1 (GI:13877517)
[Arabidopsis thaliana]; similar to homeodomain protein
GI:7239157 from (Malus domestica); contains weak hit to
Pfam profile PF00046: Homeobox domain
Length = 538
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +3
Query: 78 GSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMA 254
G + DS K EL E+E++++K NK+L V Y+ E L + ++A
Sbjct: 213 GGELSSDSNGKSIELSTIEREELQNKKNKLLTMVDEVDKRYNQYYHQMEALASSFEIVA 271
>At5g48300.1 68418.m05966 glucose-1-phosphate adenylyltransferase
small subunit 1 (APS1) / ADP-glucose pyrophosphorylase
(ADG1) identical to SP|P55228
Length = 520
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 21 NANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEK 143
+A+I +A PMD + FG +K+D +I +E AEK K
Sbjct: 232 DADITVAALPMDEQRATAFG-LMKIDEEGRI--IEFAEKPK 269
>At3g63150.1 68416.m07092 GTP-binding protein-related low similarity
to SP|Q38912 RAC-like GTP binding protein ARAC3
(GTP-binding protein ROP6) {Arabidopsis thaliana};
contains Pfam profile PF00036: EF hand (domain)
Length = 643
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 325 NVDTISPPVTKPSLSIPSKSACSIAITPASANN 227
NV + PP+T P+ + P +I TP+S +N
Sbjct: 42 NVPRVLPPITLPADAFPDYIPITIVDTPSSIDN 74
>At1g05800.1 68414.m00606 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 471
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 316 TISPPVTKPSLSIPSKSACSIAITPASA 233
T+SPP++ LS+PS S+ S AI P+ A
Sbjct: 47 TMSPPISSSPLSLPSSSS-SQAIPPSRA 73
>At5g56500.1 68418.m07051 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 597
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +3
Query: 282 ERLGLVTGGEIVSTFDSPDKVKLGHCKL-IEEVLIGDESLIRFSGVALGSACTIVIRGAT 458
ER+ ++GG V + + +L KL +E+ L ++ + G+ +G CT+ +R A+
Sbjct: 417 ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVE-EGIVVGGGCTL-LRLAS 474
Query: 459 QQVIDEAERSL-HDALCVLAATVKEPKSY 542
+ +D + +L +D V A VK+ SY
Sbjct: 475 K--VDAIKETLANDEEKVGADIVKKALSY 501
>At4g08920.1 68417.m01469 cryptochrome 1 apoprotein (CRY1) /
flavin-type blue-light photoreceptor (HY4) contains Pfam
PF03441: FAD binding domain of DNA photolyase; member of
Pfam PF00875: deoxyribodipyrimidine photolyase
superfamily; 99% identical to Cryptochrome 1 apoprotein
(Blue light photoreceptor) (flavin-type blue-light
photoreceptor) (SP:Q43125) [Arabidopsis thaliana]
Length = 681
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 390 ESLIRFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKSYVEEG 554
ES+++ +G+ LGS + I G +DEA+ LH+AL + ++ +E G
Sbjct: 456 ESVLQAAGIELGSNYPLPIVG-----LDEAKARLHEALSQMWQLEAASRAAIENG 505
>At1g48150.1 68414.m05374 MADS-box protein (AGL74 ) similar to
GB:CAA73304 from [Arabidopsis thaliana] (Gene 215 (1),
11-17 (1998)); contains Pfam domain PF00319: SRF-type
transcription factor (DNA-binding and dimerisation
domain); PMID: 12837945
Length = 323
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = -3
Query: 521 SSSKHAKRIME*TLSFVDNLLCGTTDYDRASRAQRYTR------EADQALITNQNLFDQF 360
SSS ++ ++ FVD LLC T + + R + T+ E DQ+ N ++ D F
Sbjct: 220 SSSDQSRYLVNEDSGFVDGLLCETEEENNGMRLPQETQTQPMFTEEDQSFWENLDVDDVF 279
Query: 359 AVTK 348
+ K
Sbjct: 280 GLFK 283
>At1g29450.1 68414.m03603 auxin-responsive protein, putative similar
to auxin-induced protein 6B (SP:P33083) [Glycine max]
Length = 141
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 282 ERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDES---LIRFSGVALGSACTIVIR- 449
E GL TGG I S FDS L KL++ + D L+ S S C++ ++
Sbjct: 75 EEFGLPTGGPITSPFDSVFLEYL--IKLVQRRMDADTEKALLMSISSARCSSQCSLKLQE 132
Query: 450 GATQQVI 470
+TQQ++
Sbjct: 133 RSTQQLL 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,191,305
Number of Sequences: 28952
Number of extensions: 287041
Number of successful extensions: 859
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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