Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0194
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 42 6e-04
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 41 8e-04
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 38 0.007
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 38 0.009
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.016
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 36 0.022
SB_732| Best HMM Match : AAA (HMM E-Value=0) 36 0.022
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 36 0.029
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 36 0.029
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 36 0.029
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 36 0.038
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 34 0.087
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032) 33 0.27
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_34097| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 31 0.81
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 31 1.1
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 30 1.9
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_32426| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 29 3.3
SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6) 29 3.3
SB_58373| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05) 29 4.3
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 29 4.3
SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17) 29 4.3
SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24) 28 5.7
SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038) 28 5.7
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42) 28 7.6
SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27) 28 7.6
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 28 7.6
SB_12904| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = +1
Query: 211 RLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYS 381
R GI+++MI+ K+AGRA+L+AG PGTGKTAIA+ +AQ LG PF + GSE++S
Sbjct: 153 RAAGIILEMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEIFS 209
Score = 44.8 bits (101), Expect = 6e-05
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Frame = +3
Query: 111 GISAHSHIKGLGLDENGVPIQMAAGLVGQESAREAAGDSCRYDKK*E-NGRASFTLGR-A 284
G AHSHI+GLGLD+ Q++ G+VGQ +AR AAG K+ + GRA G+
Sbjct: 120 GGGAHSHIRGLGLDDALEARQVSQGMVGQVTARRAAGIILEMIKEGKIAGRAVLIAGQPG 179
Query: 285 SWYWQNCYSSCHRSGTWN*GSFLSNGW**SLQHSRSRKQRY*WENFRRAIGLRIPETKEV 464
+ G + ++ SL+ S++ E+ L + ET E+
Sbjct: 180 TGKTAIAMGMAQSLGPDTPFTSIAGSEIFSLEMSKTEALTQPSES------LLVEET-EI 232
Query: 465 YEGEVTELTPVETENPAGGYGKTVSHVIIGLKTAKGTKQLKLDPPIYESFQRKRLKLG 638
EGEV E V+ + P G G V + LKT + L + ES +++++ G
Sbjct: 233 IEGEVVE---VQIDRPTTGTGAKVGK--LTLKTTEMETIYDLGTKMIESLTKEKVQAG 285
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
+ +L+GPPGTGKT +A A+A E G VPF + GSE
Sbjct: 82 KGAILSGPPGTGKTLLAKAVAGEAG--VPFLSISGSE 116
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
+ LL GPPGTGKT +A A+A E VPF M GS+
Sbjct: 159 KGALLVGPPGTGKTLLAKAVATE--ADVPFLSMAGSD 193
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 223 IVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGT 339
++ D + + R +L+ GPPGTGKT +A A+A E GT
Sbjct: 271 LMPDYFQGIRRPWRGVLMVGPPGTGKTMLAKAVATECGT 309
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 271 LLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQEN 399
LL GPPG GKT +A AIA EL ++PF + +E+ S E+
Sbjct: 714 LLHGPPGCGKTLLAHAIAGEL--EMPFLKLAATEIVSGVSGES 754
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYS 381
R +LL GP GTGKT IA A+A E G FC + G EV S
Sbjct: 291 RGILLYGPSGTGKTMIARAVANETGVHF-FC-INGPEVLS 328
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +1
Query: 184 VSWVKSLHV-RLQGIVVDMIRSKKMAG---RALLLAGPPGTGKTAIALAIAQELG 336
++WV++ H R + + +K G +A LL+GPPG GKT A + QELG
Sbjct: 242 LNWVRNWHKNRTKTLPKSSFFNKDTDGASLKAALLSGPPGVGKTTTATLVCQELG 296
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Frame = +1
Query: 226 VVDMIRS----KKMAGR---ALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
VV+ +R+ K++ G+ +LL G PGTGKT +A A+A E G VPF GSE
Sbjct: 146 VVEFLRNPEKFKRLGGKLPTGVLLIGSPGTGKTLLAKAVAGEAG--VPFFFCSGSE 199
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 375
+LLAGPPG GKT +A AIA E G + F + G E+
Sbjct: 20 ILLAGPPGCGKTLLAKAIANESG--INFISVKGPEL 53
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 375
+LLAGPPG GKT +A AIA E G + F + G E+
Sbjct: 20 ILLAGPPGCGKTLLAKAIANESG--INFISVKGPEL 53
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
R +LL GPPG GKT +A A+A T F +VGSE
Sbjct: 199 RGVLLYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSE 233
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 226 VVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVP 348
VVD + K + G +LL GPPGTGKT +A I L T+ P
Sbjct: 173 VVDKMGLKHVKG--ILLFGPPGTGKTLMARQIGTMLNTREP 211
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENRGI 408
LL GPPGTGKT+ LA+A++L F GS V ++RGI
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQLYPDKQF----GSMVLELNASDDRGI 55
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYS 381
LLL GPPGTGKT +A +A+E G + F + G E+ S
Sbjct: 704 LLLYGPPGTGKTLLAGVVAKECG--LNFISIKGPELLS 739
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 199 SLHVRLQGIVVDMIRSKKMAG--RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
+L L I + +K+ G R LL GPPGTGKT A ++A+ G + + M G +
Sbjct: 307 NLEEHLSSISIATSNTKRNKGMYRNLLFYGPPGTGKTMFAKSLARHSG--MDYAVMTGGD 364
Query: 373 V 375
V
Sbjct: 365 V 365
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 375
+ +LL GPPGTGKT +A A+A T+ F + GSE+
Sbjct: 212 KGVLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 247
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +1
Query: 208 VRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTK 342
VR +V ++I++K R +LL GP GTGKT++A + Q+L K
Sbjct: 1741 VRYDFLVYNLIQAK----RPVLLTGPVGTGKTSVAQKVLQKLDPK 1781
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 35.5 bits (78), Expect = 0.038
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 375
+ +LL GPPGTGKT A A+A T F ++GSE+
Sbjct: 119 KGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSEL 154
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 35.1 bits (77), Expect = 0.050
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 375
+ ++L G PGTGKT +A A+A + T F +VGSE+
Sbjct: 415 KGVILYGQPGTGKTLLAKAVANQ--TSATFLRVVGSEL 450
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 34.3 bits (75), Expect = 0.087
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELG---TKVPFCPMVGSEVYS 381
R +L GPPGTGKT +A A+A E KV F G++ S
Sbjct: 919 RGVLFFGPPGTGKTLVARALANECSQGDKKVSFFMRKGADCLS 961
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKV 345
+ LL GPPG GKT +A IAQ G V
Sbjct: 381 KVALLCGPPGLGKTTLAHVIAQHAGYNV 408
>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
Length = 1199
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +1
Query: 265 ALLLAGPPGTGKTAIALAIAQELGTKV 345
A+L+ GP G GKTA A A ELG KV
Sbjct: 640 AMLVVGPRGAGKTASIYACAGELGYKV 666
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQE 330
+LL GPPGTGKT +A A+A E
Sbjct: 847 VLLYGPPGTGKTLMAKAVATE 867
>SB_34097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 265 ALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
A+L+ GP G GKTA A A ELG K C S+
Sbjct: 30 AMLVVGPRGAGKTASIYACAGELGYKDVECDTDASQ 65
>SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 31.1 bits (67), Expect = 0.81
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 274 LAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQE 396
+ GP G+GKTA+ LA+ + L C +V +++++ D E
Sbjct: 28 IGGPVGSGKTALVLALCKYLRDSCNIC-VVTNDIFTKEDWE 67
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENRGINGRIFD 426
+ +L GPPG GKT +A AIA E + F + G E+ + E+ +FD
Sbjct: 345 KGVLFYGPPGCGKTLLAKAIANE--CQANFISIKGPELLTMWFGESEANVRDVFD 397
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQEN 399
R LL GPPG GK++ A+A EL + C M S+ T D+ N
Sbjct: 223 RGYLLYGPPGCGKSSFIQALAGELDYSI--CVMNLSDRSLTDDRLN 266
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 256 AGRALLLAGPPGTGKTAIALAIAQELGTKVP 348
AG +LL GP G+GKT + +A G P
Sbjct: 117 AGSGVLLEGPVGSGKTCLVEHVASMCGRSTP 147
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELG 336
R +LL G PG GKT++ AIA+ G
Sbjct: 1618 RPILLEGSPGVGKTSLVSAIAKASG 1642
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 271 LLAGPPGTGKTAIALAIAQEL 333
++ GPPGTGKT I L +A+ L
Sbjct: 875 VIQGPPGTGKTYIGLKVAKVL 895
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 256 AGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVY 378
+ + +++ GP G GKTA+ +AI +E+ K + G+ +
Sbjct: 506 SNQVVMVTGPVGCGKTALLMAILKEIPLKQGSVTLCGTVAF 546
>SB_32426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -2
Query: 184 PAAI*IGTPFSSNPKPFI*L*AEIPLRFSCAFHFFNFHVESSFTLLNS 41
PA +G F S+PKP +E +C H FN H+ F N+
Sbjct: 629 PAFAKLGPLFRSSPKPAELTESETEYVVNCVKHVFNDHIVFQFDCTNT 676
>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
Length = 455
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTK 342
+LL GPPG GKT + + Q L ++
Sbjct: 54 VLLTGPPGIGKTTLCSKVKQALASR 78
>SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6)
Length = 486
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 247 KKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPM 360
KK G +L ++G PGTGKTA + +++ +V CP+
Sbjct: 232 KKKPG-SLYISGAPGTGKTACLTMVIRDM-KEVSDCPV 267
>SB_58373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTK 342
+L+ G PGTGK+ + +A LG K
Sbjct: 11 ILITGTPGTGKSTTGVELANRLGFK 35
>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
Length = 1104
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 274 LAGPPGTGKTAIALAIAQEL 333
L GPPGTGKT L +A+ L
Sbjct: 869 LEGPPGTGKTTSILCLARAL 888
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTKVPFC 354
+LL GP G+GKT +A IA+ L C
Sbjct: 273 ILLLGPTGSGKTLLAQTIARCLDVPFAIC 301
>SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17)
Length = 786
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 274 LAGPPGTGKTAIALAIAQEL 333
+ GPPG GK+ +A+ +A EL
Sbjct: 132 ITGPPGFGKSCVAIHVAHEL 151
>SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24)
Length = 569
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 235 MIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYST 384
+I + G L + GP G GK+++ +AI EL + G YS+
Sbjct: 147 LIDNSYFKGELLAIVGPVGAGKSSLLMAILGELPFTEGTITVKGKIAYSS 196
>SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)
Length = 1172
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +1
Query: 265 ALLLAGPPGTGKTAIALAIAQEL 333
++++AGPPGTGK++ A+ + L
Sbjct: 1099 SIIVAGPPGTGKSSCISALIETL 1121
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 226 VVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVY 378
V+ I K R + + GP G+GK+++ LAI E+ + G VY
Sbjct: 263 VLSDITLKLKGSRLIGITGPCGSGKSSLLLAILNEMSLISGEAVVQGETVY 313
>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 958
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 196 KSLHVRLQGI-VVDMIRSKKMAGRALLLAGPPGTGKTAIALAIA 324
K++ V + G ++ I K G L L GP G+GKT + +A
Sbjct: 13 KNIGVSINGREILKTINGKVRPGEMLALMGPSGSGKTTLLNVLA 56
>SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42)
Length = 1264
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVG 366
++L GP G GK+++ +AI E+ K F +G
Sbjct: 589 VILTGPVGGGKSSLLMAILGEIPLKRGFIKAIG 621
>SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27)
Length = 514
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 253 MAGRALLLAGPPGTGKTAIALAIAQEL 333
++ R ++ GPPG GKT + + I Q L
Sbjct: 388 LSNRLAIVQGPPGCGKTFLGVKIVQLL 414
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQEL 333
+++AGPPGTGK++ A+ + L
Sbjct: 2 IIVAGPPGTGKSSCISALIETL 23
>SB_12904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 145 GWMKMVFLFKWQPVSWV 195
G++K FLF+++P SWV
Sbjct: 9 GYIKAYFLFEYEPTSWV 25
>SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 274 LAGPPGTGKTAIALAIAQELGTKVP 348
+ GPPGTGKT +A+ I + P
Sbjct: 590 VVGPPGTGKTDVAVQIISNIYHNFP 614
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,586,231
Number of Sequences: 59808
Number of extensions: 446080
Number of successful extensions: 1405
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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