Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0194
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 115 3e-26
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 71 7e-13
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 41 9e-04
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 41 9e-04
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 40 0.002
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 40 0.002
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 39 0.003
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 38 0.006
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 38 0.008
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 38 0.008
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 38 0.008
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 37 0.011
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 37 0.014
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 37 0.014
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 37 0.014
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 36 0.025
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 36 0.025
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 36 0.025
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 36 0.033
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 35 0.044
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 35 0.044
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 35 0.058
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 35 0.058
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 34 0.076
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 34 0.076
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 34 0.076
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 34 0.076
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 34 0.10
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 34 0.10
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 34 0.10
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 34 0.10
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 33 0.18
Z81100-1|CAB03194.1| 331|Caenorhabditis elegans Hypothetical pr... 33 0.23
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 32 0.31
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 32 0.31
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 32 0.31
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 32 0.31
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 32 0.31
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 32 0.31
Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 31 0.54
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 31 0.54
AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna repl... 31 0.54
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 31 0.71
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 31 0.71
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 30 1.2
AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical ... 30 1.6
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 30 1.6
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 30 1.6
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 29 2.2
Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 29 3.8
EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient rec... 29 3.8
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 29 3.8
Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 28 5.0
U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical pr... 27 8.7
U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical pr... 27 8.7
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 8.7
U37548-4|AAA79200.2| 373|Caenorhabditis elegans Hypothetical pr... 27 8.7
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 8.7
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 115 bits (276), Expect = 3e-26
Identities = 79/180 (43%), Positives = 104/180 (57%), Gaps = 5/180 (2%)
Frame = +3
Query: 114 ISAHSHIKGLGLD-ENGVPIQMAAGLVGQESAREAAG---DSCRYDKK*ENGRASFTLGR 281
I+AHSH+KGLG+D E AAG VGQ AR AA D R K GRA G
Sbjct: 33 IAAHSHVKGLGIDTETQEAHYEAAGFVGQAPARTAASIVVDMIRL--KCMAGRAVLIAGP 90
Query: 282 -ASWYWQNCYSSCHRSGTWN*GSFLSNGW**SLQHSRSRKQRY*WENFRRAIGLRIPETK 458
A+ + G L + + +K +FRRAIGLR+ ETK
Sbjct: 91 PATGKTAIALAMSQELGDGVPFVPLVAS---EVFSNEVKKTEVLMRSFRRAIGLRVKETK 147
Query: 459 EVYEGEVTELTPVETENPAGGYGKTVSHVIIGLKTAKGTKQLKLDPPIYESFQRKRLKLG 638
+VYEGEVTEL+PVE + +G GKT+SH+++ LKTAKG+KQLKLDP IY+S ++R+++G
Sbjct: 148 DVYEGEVTELSPVEASDNSG-MGKTISHLVLSLKTAKGSKQLKLDPSIYDSILKQRVEVG 206
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 223 IVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYS 381
IVVDMIR K MAGRA+L+AGPP TGKTAIALA++QELG VPF P+V SEV+S
Sbjct: 70 IVVDMIRLKCMAGRAVLIAGPPATGKTAIALAMSQELGDGVPFVPLVASEVFS 122
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +1
Query: 220 GIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYS 381
G++V MI+ K+AGRALL+ G PG GKTAIA+AI++ELG PF +V SE+YS
Sbjct: 53 GLIVKMIQEGKIAGRALLVTGEPGAGKTAIAIAISKELGEDTPFVSIVASEIYS 106
Score = 47.6 bits (108), Expect = 8e-06
Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Frame = +3
Query: 117 SAHSHIKGLGLDENGVPIQMAAGLVGQESAREAAGDSCRYDKK*E-NGRASFTLGRASWY 293
S HSHI GLGL++ ++ G+VGQ +AR+AAG + ++ + GRA G
Sbjct: 19 SVHSHITGLGLNDRLEAEYVSGGMVGQVAARQAAGLIVKMIQEGKIAGRALLVTGEPG-A 77
Query: 294 WQNCYSSCHRSGTWN*GSFLSNGW**SLQHSRSRKQRY*WENFRRAIGLRIPETKEVYEG 473
+ + F+S + + K + FRRA+G++I E EV EG
Sbjct: 78 GKTAIAIAISKELGEDTPFVSIVA-SEIYSNEINKTEALTQAFRRALGIQIKEETEVLEG 136
Query: 474 EVTELTPVETENPAGGYGKTV 536
EV L E + A G G V
Sbjct: 137 EVISL---EVDRSANGMGPKV 154
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +1
Query: 208 VRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQE 330
V L +V + + + +A++LAGPPGTGKT IA AIA E
Sbjct: 209 VTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +1
Query: 208 VRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQE 330
V L +V + + + +A++LAGPPGTGKT IA AIA E
Sbjct: 209 VTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
+ +LL GPPGTGKT +A AIA E +VPF GSE
Sbjct: 235 KGVLLVGPPGTGKTLLARAIAGE--AQVPFFHTAGSE 269
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +1
Query: 208 VRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQE 330
V L +V + + + +A++LAGPPGTGKT IA AIA E
Sbjct: 209 VTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/55 (43%), Positives = 31/55 (56%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENRGINGRIFD 426
R +LL GPPGTGKT IA A+A E G+ F + G EV S E+ + F+
Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGSF--FFLINGPEVMSKMSGESESNLRKAFE 297
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENRGINGRIFD 426
R +L GPPG GKT +A AIA E + F + G E+ + E+ +FD
Sbjct: 518 RGVLFYGPPGCGKTLLAKAIANE--CQANFISIKGPELLTMWFGESEANVRDVFD 570
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
R LL GPPG GKT +A A+A E + VPF M GSE
Sbjct: 319 RGALLTGPPGCGKTLLAKALAAE--STVPFISMNGSE 353
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
R LL GPPG GKT +A A+A E + VPF M GSE
Sbjct: 319 RGALLTGPPGCGKTLLAKALAAE--STVPFISMNGSE 353
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQEN 399
R +LL GPPGTGKT IA A+A E G F + G E+ S E+
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKMSGES 287
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENRGINGRIFD 426
R +L GPPG GKT +A AIA E + F + G E+ + E+ +FD
Sbjct: 517 RGVLFYGPPGCGKTLLAKAIANE--CQANFISIKGPELLTMWFGESEANVRDVFD 569
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQEN 399
R +LL GPPGTGKT IA A+A E G F + G E+ S E+
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKMSGES 287
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENRGINGRIFD 426
R +L GPPG GKT +A AIA E + F + G E+ + E+ +FD
Sbjct: 517 RGVLFYGPPGCGKTLLAKAIANE--CQANFISIKGPELLTMWFGESEANVRDVFD 569
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +1
Query: 244 SKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENR----GIN 411
+ + G L GPPG GKT+IA AIA+ +G K + G S R +
Sbjct: 324 NNSVKGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVSLGGIRDESDIRGHRRTYVAAMP 383
Query: 412 GRIFDVL*AC 441
GRI + L C
Sbjct: 384 GRIIEALKTC 393
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENRGINGRIFD 426
R ++ GPPG GKT A A+A EL +P + +E+ S E R+FD
Sbjct: 240 RGFIVHGPPGCGKTMFAQAVAGELA--IPMLQLAATELVSGVSGETEEKIRRLFD 292
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELG 336
+ +LL GPPG GKT +A A+A E G
Sbjct: 569 QGILLCGPPGCGKTLLAKAVANETG 593
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENRGINGRIFD 426
R ++ GPPG GKT A A+A EL +P + +E+ S E R+FD
Sbjct: 240 RGFIVHGPPGCGKTMFAQAVAGELA--IPMLQLAATELVSGVSGETEEKIRRLFD 292
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELG 336
+ +LL GPPG GKT +A A+A E G
Sbjct: 569 QGILLCGPPGCGKTLLAKAVANETG 593
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
+ +L GPPGTGKT +A A A E VPF + GSE
Sbjct: 327 KGAILTGPPGTGKTLLAKATAGE--ANVPFITVSGSE 361
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +1
Query: 214 LQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQEL 333
++ I V+++R K + G+ L GPPG GKT+IA +IA L
Sbjct: 491 MEFIAVNLLR-KSIGGKILCFHGPPGVGKTSIAKSIATAL 529
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 172 KWQPVSWVKSL-HVRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVP 348
+W+ V ++ L+ I ++ S+ + ++L G PG GKT IA A+A E K+
Sbjct: 463 RWEDVGGLEETKQTVLESIRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEF--KIA 520
Query: 349 FCPMVGSEV 375
F + G E+
Sbjct: 521 FLSVKGPEL 529
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 172 KWQPVSWVKSL-HVRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVP 348
+W+ V ++ L+ I ++ S+ + ++L G PG GKT IA A+A E K+
Sbjct: 463 RWEDVGGLEETKQTVLESIRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEF--KIA 520
Query: 349 FCPMVGSEV 375
F + G E+
Sbjct: 521 FLSVKGPEL 529
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 172 KWQPVSWVKSL-HVRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVP 348
+W+ V ++ L+ I ++ S+ + ++L G PG GKT IA A+A E K+
Sbjct: 463 RWEDVGGLEETKQTVLESIRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEF--KIA 520
Query: 349 FCPMVGSEV 375
F + G E+
Sbjct: 521 FLSVKGPEL 529
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 199 SLHVRLQGIVVDMIRSKKMAG--RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
+L RL+ I + +K+ G R ++ GPPGTGKT A ++AQ G + + + G +
Sbjct: 320 ALERRLRDIAITTSNTKRNNGLFRNVMFYGPPGTGKTLFAKSLAQHSG--LDYAVLTGGD 377
Query: 373 V 375
+
Sbjct: 378 I 378
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 375
+ +LL GPPGTGKT +A A+A T+ F + GSE+
Sbjct: 194 KGVLLFGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 229
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKV 345
R +LL GPPGTGKT++ +AQ L ++
Sbjct: 173 RLILLTGPPGTGKTSLCKGLAQHLSIRM 200
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 375
+ +LL GPPGTGKT +A A+A T+ F + GSE+
Sbjct: 189 KGVLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 224
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 375
+ +LL GPPGTGKT +A A+A T+ F + GSE+
Sbjct: 210 KGVLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 245
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 375
+ +LL GPPGTGKT A A+A T F ++GSE+
Sbjct: 212 KGVLLYGPPGTGKTLCARAVANR--TDACFIRVIGSEL 247
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 35.1 bits (77), Expect = 0.044
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 372
R +L+ GPPG GKT +A A+A T F +VGSE
Sbjct: 196 RGVLMYGPPGCGKTMLAKAVA--ANTAASFIRVVGSE 230
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPF 351
+ +LL GPPGTGK+ IA A+A E G F
Sbjct: 152 QGILLFGPPGTGKSYIAKAVATEAGESTFF 181
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 34.7 bits (76), Expect = 0.058
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Frame = +1
Query: 175 WQPVSWVKSLHVRLQGIVVDMIRSKKMAG-------RALLLAGPPGTGKTAIALAIAQEL 333
W + + L L+ ++ +R +G R +LL GPPG GKT +A A+A+
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 138
Query: 334 GTKVPFCPMVGSEVYSTADQ---ENRGINGRIFDV 429
G C + +V + D+ E++ + +F V
Sbjct: 139 G-----CRFINLQVSNLTDKWYGESQKLAAAVFSV 168
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 34.7 bits (76), Expect = 0.058
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Frame = +1
Query: 175 WQPVSWVKSLHVRLQGIVVDMIRSKKMAG-------RALLLAGPPGTGKTAIALAIAQEL 333
W + + L L+ ++ +R +G R +LL GPPG GKT +A A+A+
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 141
Query: 334 GTKVPFCPMVGSEVYSTADQ---ENRGINGRIFDV 429
G C + +V + D+ E++ + +F V
Sbjct: 142 G-----CRFINLQVSNLTDKWYGESQKLAAAVFSV 171
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 375
+ +L+ GPPGTGKT +A A+A + TK F + G ++
Sbjct: 212 KGVLMYGPPGTGKTMMARAVAAQ--TKSTFLKLAGPQL 247
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVP 348
R +LL GPPGTGKT +A I + L + P
Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAREP 359
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVP 348
R +LL GPPGTGKT +A I + L + P
Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAREP 359
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVP 348
R +LL GPPGTGKT +A I + L + P
Sbjct: 265 RGILLFGPPGTGKTLMARQIGKMLNAREP 293
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 34.3 bits (75), Expect = 0.076
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 375
+ ++L G PGTGKT +A A+A + T F +VGSE+
Sbjct: 223 KGVILYGCPGTGKTLLAKAVANQ--TSATFLRIVGSEL 258
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 256 AGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENRGINGRIFDV 429
A + ++L G PGTGKT +A A+A T F GS++ E + +IF +
Sbjct: 216 APKGVILYGEPGTGKTLLAKAVAN--STSATFIRATGSDLVQKQSGEGARLVRQIFQM 271
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 208 VRLQGIVVDMIRSKKMAGRAL---LLAGPPGTGKTAIALAIAQELGTK 342
+ Q VV M++ + GR L L GPPGTGKT+ ALA ++L K
Sbjct: 29 IAYQDEVVTMLKGA-LQGRDLPHLLFYGPPGTGKTSAALAFCRQLFPK 75
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL 333
+ LL GPPGTGKT +A A+A +L
Sbjct: 177 KGCLLFGPPGTGKTLLARAVASQL 200
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL 333
+ LL GPPGTGKT +A A+A +L
Sbjct: 185 KGCLLFGPPGTGKTLLARAVASQL 208
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMV 363
LL GPPGTGKT LA A+++ + MV
Sbjct: 65 LLFYGPPGTGKTTTVLAAARQMYSPTKMASMV 96
>Z81100-1|CAB03194.1| 331|Caenorhabditis elegans Hypothetical
protein K08G2.7 protein.
Length = 331
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 254 IFLLLIISTTIPCSLTCRLLTHETGCHLNRNTIFIQPQAFYMTVSRDPFAF*LCFSL 84
IFL+L S +P ++ R LTH T N+ FI Q + V + F + F L
Sbjct: 194 IFLILSNSLYVPIIISIRKLTHLTSAQQNKPQKFIMCQCLLIVVEKIIFGICIFFKL 250
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 208 VRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQE 330
V L + ++ + + + +LL GPPG GKT +A A+A E
Sbjct: 194 VILPALNPNLFKGLRQPVKGILLFGPPGNGKTLLAKAVAGE 234
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYS 381
+ ++ GPPGTGKT +A A+A E KV F G++ S
Sbjct: 426 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLS 468
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYS 381
+ ++ GPPGTGKT +A A+A E KV F G++ S
Sbjct: 424 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLS 466
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYS 381
+ ++ GPPGTGKT +A A+A E KV F G++ S
Sbjct: 426 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLS 468
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYS 381
+ ++ GPPGTGKT +A A+A E KV F G++ S
Sbjct: 426 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLS 468
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYS 381
+ ++ GPPGTGKT +A A+A E KV F G++ S
Sbjct: 424 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLS 466
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYS 381
+ ++ GPPGTGKT +A A+A E KV F G++ S
Sbjct: 426 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLS 468
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQEL---GTKVPFCPMVGSEVYS 381
+ ++ GPPGTGKT +A A+A E KV F G++ S
Sbjct: 426 KGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLS 468
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +1
Query: 175 WQPVSWVKSLHVRLQGIVV------DMIRSKKMAGRALLLAGPPGTGKTAIALAIAQE 330
W V+ ++ L+ IVV D+ + + +LL GPPGTGKT I +A +
Sbjct: 315 WADVAGLEGAKKALREIVVLPFKRPDVFTGIRAPPKGVLLFGPPGTGKTMIGRCVASQ 372
>Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical
protein Y49E10.9 protein.
Length = 454
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 160 VFLFKWQPVSWVKSLHVRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAI 309
+ +K V +K LQG ++D + + +AG + G G GKT +
Sbjct: 99 ILTWKGITVEEIKKKKDTLQGRILDKVNGRALAGELTFIMGSSGAGKTTL 148
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 205 HVRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAI 309
H R V+D + K AG+ L + GP G+GK+ I
Sbjct: 1012 HQRPDYTVLDSVNLKVEAGKTLAIVGPSGSGKSTI 1046
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 205 HVRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAI 309
H R V+D + K AG+ L + GP G+GK+ I
Sbjct: 1012 HQRPDYTVLDSVNLKVEAGKTLAIVGPSGSGKSTI 1046
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 265 ALLLAGPPGTGKTAIALAIAQELGTKVPFC 354
++ ++G PGTGKTA + + + LG V C
Sbjct: 197 SIYVSGQPGTGKTATTMRVLKSLGKSVRSC 226
>AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 2 protein.
Length = 334
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQE-LGTKV 345
++L+GPPG GKT A+A+E LG KV
Sbjct: 46 IVLSGPPGCGKTTSVWALARELLGDKV 72
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
C05A9.1 protein.
Length = 1283
Score = 31.1 bits (67), Expect = 0.71
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 211 RLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAI 309
R +++D + K AGR L L GP G+GK+ I
Sbjct: 1048 RSDKMILDGVSLKLPAGRTLALVGPSGSGKSTI 1080
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENRGIN 411
R L GPPGTGK++ A+A G V C + SE D+ N +N
Sbjct: 198 RGYLFYGPPGTGKSSFISALASHFGYSV--CLLSLSERTLDDDRLNHLLN 245
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTADQENRGIN 411
R L GPPGTGK++ A+A G V C + SE D+ N +N
Sbjct: 244 RGYLFYGPPGTGKSSFISALASHFGYSV--CLLSLSERTLDDDRLNHLLN 291
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALAIAQELGTKV 345
+A LL+G PG GKT A Q+LG ++
Sbjct: 341 KAALLSGSPGVGKTTCAYMACQQLGLQL 368
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 229 VDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELG 336
+D + ++ + + LLL+GP G GK+ +A +A++ G
Sbjct: 320 MDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQAG 355
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 229 VDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQEL 333
V+ I+S G +++ GPPGTGKT +A+ I +
Sbjct: 811 VEAIKSGMQPGLTMVV-GPPGTGKTDVAVQIISNI 844
>AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical
protein Y39A1A.12 protein.
Length = 636
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 214 LQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQEL 333
++ + ++I K+ A+ ++G PGTGKTA A+ +
Sbjct: 277 IEKFIREVIDPKRGESSAMYISGVPGTGKTATVRAVVNSM 316
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 247 KKMAGRAL-LLAGPPGTGKTAIALAIAQELGTK 342
K++ R L L+ GPPGTGKT ++ I L K
Sbjct: 455 KQVLTRPLSLIQGPPGTGKTVVSATIVYHLVQK 487
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 247 KKMAGRAL-LLAGPPGTGKTAIALAIAQELGTK 342
K++ R L L+ GPPGTGKT ++ I L K
Sbjct: 455 KQVLTRPLSLIQGPPGTGKTVVSATIVYHLVQK 487
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +1
Query: 172 KW-QPV-SWVKSLHVRLQGIVVDM-IRSKKMAGRALLLAGPPGTGKTAIA-LAIAQELG 336
KW QP KSL+ R+Q + D +RSK+ LLL P G GKT +A L + QE+G
Sbjct: 463 KWAQPAFDGYKSLN-RIQSRLCDSALRSKEH----LLLCAPTGAGKTNVALLTMLQEIG 516
>Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical protein
C29E6.2 protein.
Length = 1193
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +3
Query: 411 WENFRRAIGLRI---PETKEVYEGEVTELTPVETE 506
W NFRR GL + PE E+YE E E T T+
Sbjct: 1112 WSNFRRRFGLSVSTDPEIDEMYERE-AEFTSEMTQ 1145
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELG 336
+L+ G PGTGK+ + +A++LG
Sbjct: 12 ILVTGSPGTGKSTLGQQVAEKLG 34
>EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient receptor
potential subfamilyA-1 protein.
Length = 1206
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +3
Query: 411 WENFRRAIGLRI---PETKEVYEGEVTELTPVETE 506
W NFRR GL + PE E+YE E E T T+
Sbjct: 1125 WSNFRRRFGLSVSTDPEIDEMYERE-AEFTSEMTQ 1158
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 253 MAGRALLLAGPPGTGKTAIALAIAQELGTKV 345
+ + +LL G PG GK++ +A+AQ G +
Sbjct: 1347 LISKPILLEGAPGCGKSSTVMALAQLTGNPI 1377
>Z82285-6|CAB05299.1| 252|Caenorhabditis elegans Hypothetical
protein T28F3.6 protein.
Length = 252
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 181 PVSWVKSLHVRLQGIVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIA 324
P +W +L + L + DM KK+A +L+ GPP GKT + +A
Sbjct: 6 PQTW--ALWLILSEMASDMQEDKKVA--KILVLGPPKAGKTTLCTFLA 49
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 241 RSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFC 354
+S ++ +LL GP G GKT + +A+ L + C
Sbjct: 135 QSVRLEKSNVLLVGPSGVGKTFLTQTLARVLDVPIALC 172
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 241 RSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFC 354
+S ++ +LL GP G GKT + +A+ L + C
Sbjct: 251 QSVRLEKSNVLLVGPSGVGKTFLTQTLARVLDVPIALC 288
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical
protein ZK1067.2 protein.
Length = 2219
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 271 LLAGPPGTGKTAIALAIAQEL 333
L+ GPPGTGKT I + I + +
Sbjct: 827 LIQGPPGTGKTHIGVQIVKTI 847
>U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical
protein T03F1.8b protein.
Length = 205
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 247 KKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPF 351
+KM R ++L+GP G GK+ I QE F
Sbjct: 9 RKMPCRPIVLSGPSGGGKSTILTRAMQEYPNSFAF 43
>U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical
protein T03F1.8a protein.
Length = 216
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 247 KKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPF 351
+KM R ++L+GP G GK+ I QE F
Sbjct: 20 RKMPCRPIVLSGPSGGGKSTILTRAMQEYPNSFAF 54
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALA 318
+ L+L GPPG+GKT LA
Sbjct: 2531 KPLVLCGPPGSGKTMTLLA 2549
>U37548-4|AAA79200.2| 373|Caenorhabditis elegans Hypothetical
protein C54D2.1 protein.
Length = 373
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 338 VPSS*AMARAIAVLPVPGGPAKSKARPAIFLLLIISTTIPCSL 210
+PS+ + A V VP G + +P ++ ++ T I C+L
Sbjct: 68 LPSAASAAAVNGVYQVPAGAVRPVYQPVVYYPQVVRTPIACAL 110
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 262 RALLLAGPPGTGKTAIALA 318
+ L+L GPPG+GKT LA
Sbjct: 2531 KPLVLCGPPGSGKTMTLLA 2549
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 268 LLLAGPPGTGKTAIALAIAQELGTKV 345
L+L GP G GKTA+ A+A++ ++
Sbjct: 819 LVLIGPSGVGKTALFRALAKQENMRI 844
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,442,851
Number of Sequences: 27780
Number of extensions: 340628
Number of successful extensions: 1047
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -