Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0193
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    26   0.31 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.9  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 538 HTGSALATGPDFGSGNCSVALE 473
           H G+    GPD G GN SV ++
Sbjct: 309 HAGNGWQWGPDAGLGNLSVCID 330


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 162 LIKLNRKRKCKEISSTQHGLHPPTKPTRVSRN 257
           L  +NR  +  E+   Q   +PPTKP    R+
Sbjct: 531 LSTINRHLRGNELLPMQQSQNPPTKPYGTCRS 562


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 439 SALGIDSPDCWAKF*NCPW 383
           +++G D  DCWA F   PW
Sbjct: 181 TSVGEDEYDCWATF-QEPW 198


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 371 WVSNPRTVSK 400
           W+ NPRT+++
Sbjct: 464 WIQNPRTITE 473


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 77  HERFSTFRKK*SVGSLTWSKAT 142
           H+R++T+    S G L W   T
Sbjct: 668 HQRYTTYSDVWSFGVLLWEIVT 689


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 109 IGGVIDMVQSHKNKPTQALSNS 174
           +GGVID   S +N+P    S+S
Sbjct: 407 VGGVIDDGGSGQNQPESPESSS 428


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -2

Query: 267 WNCDCD 250
           W+CDCD
Sbjct: 708 WSCDCD 713


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,747
Number of Sequences: 336
Number of extensions: 3298
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)