Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0189
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    25   2.5  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   4.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   10.0 

>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 489 GNHGDGFPFDGPGRVVAPPF 548
           G  G GFPF G G+   P F
Sbjct: 72  GQQGQGFPFFGQGQSGFPSF 91


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 510 PFDGPGRVVAPPFHRPS 560
           PF G    + PPFHRP+
Sbjct: 101 PFGGRPWWLRPPFHRPT 117


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/53 (18%), Positives = 26/53 (49%)
 Frame = +1

Query: 229  KQLFKRKRCGLKDIDEDSHARNRRXIIQEGWNKREVTYRLLNGSSTMSKDRIE 387
            +Q+ +  R G +++DE    + +  ++  GWN  +V  +        +++ I+
Sbjct: 1168 RQVARDLRLGWENVDELQEGQFQWPMLSFGWNLADVLRKTKEQKIAQAQEAID 1220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,904
Number of Sequences: 2352
Number of extensions: 14903
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)