Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0189
         (601 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41266-1|AAM48565.1|  521|Caenorhabditis elegans Zinc metallopro...    70   1e-12
AB007817-1|BAA28353.1|  521|Caenorhabditis elegans matrix metall...    70   1e-12
AF022971-4|AAG23982.2|  579|Caenorhabditis elegans Hypothetical ...    58   4e-09
AB007815-1|BAA28351.1|  579|Caenorhabditis elegans matrix metall...    58   4e-09
Z78414-1|CAB01669.2|  472|Caenorhabditis elegans Hypothetical pr...    42   4e-04
Z95309-1|CAB08559.2|  446|Caenorhabditis elegans Hypothetical pr...    38   0.007
U00038-1|AAA50663.2|  279|Caenorhabditis elegans Hypothetical pr...    37   0.013
AF099191-1|AAF78096.1|  279|Caenorhabditis elegans MMP-like prot...    37   0.013
AF040648-1|AAK21412.1|  519|Caenorhabditis elegans Hypothetical ...    32   0.27 
Z81502-2|CAB04106.2|  720|Caenorhabditis elegans Hypothetical pr...    31   0.63 
L29439-1|AAA98751.1|  658|Caenorhabditis elegans endoprotease pr...    29   1.9  
L29438-1|AAA98750.1|  684|Caenorhabditis elegans endoprotease pr...    29   1.9  
AF039719-6|AAO12410.1|  666|Caenorhabditis elegans Blistered cut...    29   1.9  
AF039719-5|AAB96755.1|  699|Caenorhabditis elegans Blistered cut...    29   1.9  
AF039719-4|AAB96753.1|  670|Caenorhabditis elegans Blistered cut...    29   1.9  
AF039719-3|AAB96756.1|  730|Caenorhabditis elegans Blistered cut...    29   1.9  
AF039719-2|AAB96757.1|  827|Caenorhabditis elegans Blistered cut...    29   1.9  
AF039719-1|AAB96754.1|  942|Caenorhabditis elegans Blistered cut...    29   1.9  
AF077534-2|AAC26284.1|  648|Caenorhabditis elegans Temporarily a...    29   3.3  
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a...    29   3.3  
AF040648-3|AAL06034.2|  453|Caenorhabditis elegans Hypothetical ...    28   5.9  
AB007816-1|BAA28352.1|  394|Caenorhabditis elegans matrix metall...    28   5.9  

>U41266-1|AAM48565.1|  521|Caenorhabditis elegans Zinc
           metalloprotease protein 1 protein.
          Length = 521

 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
 Frame = +1

Query: 73  LDEVNFLLQYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKR 252
           +D   FL +YGYL+          +S+S+S+A+K MQ  AGL +TG LD  T Q+ +R R
Sbjct: 24  VDHTKFLQKYGYLTSG----DNQLSSESLSDALKNMQRMAGLEETGELDERTIQMMERPR 79

Query: 253 CGLKDIDEDSHARNRRXI-IQEGWNKREVTY--RLLNGSSTMSKDRIERLLXNGLEVWA 420
           CG  D+++   +R +R    Q  W ++ +TY  + +  S+ +S D + R +      W+
Sbjct: 80  CGHPDVEDHQKSRGKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLRRTMHQAASQWS 138


>AB007817-1|BAA28353.1|  521|Caenorhabditis elegans matrix
           metalloproteinase protein.
          Length = 521

 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
 Frame = +1

Query: 73  LDEVNFLLQYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKR 252
           +D   FL +YGYL+          +S+S+S+A+K MQ  AGL +TG LD  T Q+ +R R
Sbjct: 24  VDHTKFLQKYGYLTSG----DNQLSSESLSDALKNMQRMAGLEETGELDERTIQMMERPR 79

Query: 253 CGLKDIDEDSHARNRRXI-IQEGWNKREVTY--RLLNGSSTMSKDRIERLLXNGLEVWA 420
           CG  D+++   +R +R    Q  W ++ +TY  + +  S+ +S D + R +      W+
Sbjct: 80  CGHPDVEDHQKSRGKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLRRTMHQAASQWS 138


>AF022971-4|AAG23982.2|  579|Caenorhabditis elegans Hypothetical
           protein C31B8.8 protein.
          Length = 579

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 32/106 (30%), Positives = 52/106 (49%)
 Frame = +1

Query: 151 QSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRXIIQEGWNKR 330
           Q    A++K Q FAG+ +TG LD  TK      RCG+ D      + +     Q  W+K 
Sbjct: 88  QVFKSAIRKFQEFAGIAKTGFLDAATKAKMALSRCGVTDAPLALTSGSS----QFKWSKT 143

Query: 331 EVTYRLLNGSSTMSKDRIERLLXNGLEVWAPHGNLHFTKLDEGKAA 468
            +TY + + SS +SKD + R +     +W+    L F+++  G  +
Sbjct: 144 RLTYSIESWSSDLSKDDVRRAISEAYGLWSKVTPLEFSEVPAGSTS 189



 Score = 33.5 bits (73), Expect = 0.12
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +3

Query: 462 SGIQVYFASGNHGDGFPFDGPGRVVAPPFHRPSGIYILMMTKTW 593
           S I++ F   NH D +PFDG G V+A      SG++     + W
Sbjct: 189 SDIKIRFGVRNHNDPWPFDGEGGVLAHATMPESGMFHFDDDENW 232


>AB007815-1|BAA28351.1|  579|Caenorhabditis elegans matrix
           metalloproteinase protein.
          Length = 579

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 32/106 (30%), Positives = 52/106 (49%)
 Frame = +1

Query: 151 QSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRXIIQEGWNKR 330
           Q    A++K Q FAG+ +TG LD  TK      RCG+ D      + +     Q  W+K 
Sbjct: 88  QVFKSAIRKFQEFAGIAKTGFLDAATKAKMALSRCGVTDAPLALTSGSS----QFKWSKT 143

Query: 331 EVTYRLLNGSSTMSKDRIERLLXNGLEVWAPHGNLHFTKLDEGKAA 468
            +TY + + SS +SKD + R +     +W+    L F+++  G  +
Sbjct: 144 RLTYSIESWSSDLSKDDVRRAISEAYGLWSKVTPLEFSEVPAGSTS 189



 Score = 33.5 bits (73), Expect = 0.12
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +3

Query: 462 SGIQVYFASGNHGDGFPFDGPGRVVAPPFHRPSGIYILMMTKTW 593
           S I++ F   NH D +PFDG G V+A      SG++     + W
Sbjct: 189 SDIKIRFGVRNHNDPWPFDGEGGVLAHATMPESGMFHFDDDENW 232


>Z78414-1|CAB01669.2|  472|Caenorhabditis elegans Hypothetical
           protein W09D12.1 protein.
          Length = 472

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
 Frame = +1

Query: 73  LDEVN-FLLQYGYLSKDLAGVGYTYTSQS---ISEAVKKMQAFAGLPQTGVLDVPTKQLF 240
           +DE   +L ++GY+  +      T    S     +A+ + Q+      +G +DVPT+   
Sbjct: 34  MDEAKVYLFKFGYMIPEPHQNVKTIQEPSEKQTKDALIRFQSAFLYYSSGDVDVPTQAKM 93

Query: 241 KRKRCGLKDIDEDSHARNRRXIIQEGWNKREVTYRLLNGSSTMSKDRIERLLXNGLEVWA 420
              RC   D+D+           +E W K+ +TY+++N  +T+S+ +I        E W 
Sbjct: 94  NEWRCANNDMDKGQPIPPASK--KELWTKKSLTYKVVNTPNTLSQAQIRSAAHEAFEQWT 151

Query: 421 PHGNLHFTK 447
                 F +
Sbjct: 152 RASGFKFVE 160


>Z95309-1|CAB08559.2|  446|Caenorhabditis elegans Hypothetical
           protein H36L18.1 protein.
          Length = 446

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +3

Query: 456 RQSGIQVYFASGNHGDGFPFDGPGRVVAPPF 548
           +++ I + FA+G+H DG PFDG G ++A  F
Sbjct: 23  QKANIDIVFAAGDHEDGEPFDGKGNILAHAF 53


>U00038-1|AAA50663.2|  279|Caenorhabditis elegans Hypothetical
           protein T21D11.1 protein.
          Length = 279

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +3

Query: 468 IQVYFASGNHGDGFPFDGPGRVVAPPFHRPSG 563
           I + F  G H DGFPFDG   VVA  F+   G
Sbjct: 105 IYIAFEKGEHSDGFPFDGQDGVVAHAFYPRDG 136


>AF099191-1|AAF78096.1|  279|Caenorhabditis elegans MMP-like protein
           protein.
          Length = 279

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +3

Query: 468 IQVYFASGNHGDGFPFDGPGRVVAPPFHRPSG 563
           I + F  G H DGFPFDG   VVA  F+   G
Sbjct: 105 IYIAFEKGEHSDGFPFDGQDGVVAHAFYPRDG 136


>AF040648-1|AAK21412.1|  519|Caenorhabditis elegans Hypothetical
           protein H19M22.3a protein.
          Length = 519

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
 Frame = +1

Query: 97  QYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDE 276
           +YGYL     G+ ++ + Q   +A+   Q    + QTG +D  T +   + RC   D+ +
Sbjct: 64  KYGYLK----GIDHS-SPQEFRQALMFFQEVLEVEQTGNVDEMTVEAASKPRCTQTDVRQ 118

Query: 277 DSHARNRRXIIQE--GW---NKREVTYRLLNGSSTMSKDRIE--RLLXNGLEVWA 420
           +   R +R  + +   W   + + VT +      T   DR+E  +++    ++W+
Sbjct: 119 EQTKRTKRFTLSKRAKWAHASGQSVTLKWYISDYTSDIDRLETRKVVEKAFKLWS 173



 Score = 27.9 bits (59), Expect = 5.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 459 QSGIQVYFASGNHGDGFPFDG 521
           ++ I + +A GNHGD   FDG
Sbjct: 196 EADINILWAEGNHGDEHDFDG 216


>Z81502-2|CAB04106.2|  720|Caenorhabditis elegans Hypothetical
           protein F14B6.2 protein.
          Length = 720

 Score = 31.1 bits (67), Expect = 0.63
 Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = +1

Query: 157 ISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKDIDEDSHARNRRXIIQEGWNKREV 336
           +SE+ + M     L  T  L   T +  K+   G+K++ +++H R+++ +++E + +   
Sbjct: 404 LSESTRMMWDMDELKYTTFLAPKTTEQTKQVEEGVKEVIQEAHERSQKPMLKETFEEATT 463

Query: 337 -TYRLLNGSSTMSKDRIER 390
            T + L G   MSKD+ E+
Sbjct: 464 STEKPLPGG--MSKDQWEK 480


>L29439-1|AAA98751.1|  658|Caenorhabditis elegans endoprotease
           protein.
          Length = 658

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 459 QSGIQVYFAS-GNHGDGFPFDGPGRVVAPPFHR 554
           Q  I +Y AS G   DG  FDGPG +    F+R
Sbjct: 291 QDHIDIYSASWGPEDDGKTFDGPGPLAREAFYR 323


>L29438-1|AAA98750.1|  684|Caenorhabditis elegans endoprotease
           protein.
          Length = 684

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 459 QSGIQVYFAS-GNHGDGFPFDGPGRVVAPPFHR 554
           Q  I +Y AS G   DG  FDGPG +    F+R
Sbjct: 291 QDHIDIYSASWGPEDDGKTFDGPGPLAREAFYR 323


>AF039719-6|AAO12410.1|  666|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformf protein.
          Length = 666

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 459 QSGIQVYFAS-GNHGDGFPFDGPGRVVAPPFHR 554
           Q  I +Y AS G   DG  FDGPG +    F+R
Sbjct: 291 QDHIDIYSASWGPEDDGKTFDGPGPLAREAFYR 323


>AF039719-5|AAB96755.1|  699|Caenorhabditis elegans Blistered
           cuticle protein 4, isoforme protein.
          Length = 699

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 459 QSGIQVYFAS-GNHGDGFPFDGPGRVVAPPFHR 554
           Q  I +Y AS G   DG  FDGPG +    F+R
Sbjct: 291 QDHIDIYSASWGPEDDGKTFDGPGPLAREAFYR 323


>AF039719-4|AAB96753.1|  670|Caenorhabditis elegans Blistered
           cuticle protein 4, isoforma protein.
          Length = 670

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 459 QSGIQVYFAS-GNHGDGFPFDGPGRVVAPPFHR 554
           Q  I +Y AS G   DG  FDGPG +    F+R
Sbjct: 291 QDHIDIYSASWGPEDDGKTFDGPGPLAREAFYR 323


>AF039719-3|AAB96756.1|  730|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformb protein.
          Length = 730

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 459 QSGIQVYFAS-GNHGDGFPFDGPGRVVAPPFHR 554
           Q  I +Y AS G   DG  FDGPG +    F+R
Sbjct: 291 QDHIDIYSASWGPEDDGKTFDGPGPLAREAFYR 323


>AF039719-2|AAB96757.1|  827|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformc protein.
          Length = 827

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 459 QSGIQVYFAS-GNHGDGFPFDGPGRVVAPPFHR 554
           Q  I +Y AS G   DG  FDGPG +    F+R
Sbjct: 291 QDHIDIYSASWGPEDDGKTFDGPGPLAREAFYR 323


>AF039719-1|AAB96754.1|  942|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformd protein.
          Length = 942

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 459 QSGIQVYFAS-GNHGDGFPFDGPGRVVAPPFHR 554
           Q  I +Y AS G   DG  FDGPG +    F+R
Sbjct: 291 QDHIDIYSASWGPEDDGKTFDGPGPLAREAFYR 323


>AF077534-2|AAC26284.1|  648|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 218, isoform b protein.
          Length = 648

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 62  TPLRLTRLIFCYNMDTYRKIWPELATLTRHNLFPKLSRKCRPSQ 193
           T +R  RL+   N  + R +W EL  +    L  KL  +C+  Q
Sbjct: 129 TSMRRDRLVGTSNFGSQRSLWCELPEVRAAGLLEKLDDECKLRQ 172


>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 218, isoform a protein.
          Length = 1136

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +2

Query: 62  TPLRLTRLIFCYNMDTYRKIWPELATLTRHNLFPKLSRKCRPSQ 193
           T +R  RL+   N  + R +W EL  +    L  KL  +C+  Q
Sbjct: 617 TSMRRDRLVGTSNFGSQRSLWCELPEVRAAGLLEKLDDECKLRQ 660


>AF040648-3|AAL06034.2|  453|Caenorhabditis elegans Hypothetical
           protein H19M22.3c protein.
          Length = 453

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 459 QSGIQVYFASGNHGDGFPFDG 521
           ++ I + +A GNHGD   FDG
Sbjct: 164 EADINILWAEGNHGDEHDFDG 184


>AB007816-1|BAA28352.1|  394|Caenorhabditis elegans matrix
           metalloproteinase protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 459 QSGIQVYFASGNHGDGFPFDG 521
           ++ I + +A GNHGD   FDG
Sbjct: 105 EADINILWAEGNHGDEHDFDG 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,652,355
Number of Sequences: 27780
Number of extensions: 338661
Number of successful extensions: 726
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)