Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0189
(601 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g24140.1 68414.m03045 matrixin family protein similar to matr... 46 3e-05
At1g70170.1 68414.m08074 matrixin family protein similar to SP|P... 40 0.001
At2g45040.1 68415.m05607 matrix metalloproteinase nearly identic... 39 0.003
At4g16640.1 68417.m02515 matrix metalloproteinase, putative meta... 36 0.027
At1g59970.1 68414.m06755 matrixin family protein similar to SP|P... 34 0.063
At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to vil... 30 1.3
At2g18470.1 68415.m02151 protein kinase family protein contains ... 29 2.4
At5g62580.1 68418.m07855 expressed protein 28 5.4
At2g03480.2 68415.m00308 dehydration-responsive protein-related ... 28 5.4
At2g03480.1 68415.m00307 dehydration-responsive protein-related ... 28 5.4
At1g54420.1 68414.m06208 hypothetical protein 27 7.2
At1g49580.1 68414.m05559 calcium-dependent protein kinase, putat... 27 7.2
At3g10560.1 68416.m01267 cytochrome P450, putative similar to cy... 27 9.5
At2g40130.1 68415.m04935 heat shock protein-related contains sim... 27 9.5
At2g33520.1 68415.m04109 expressed protein 27 9.5
At1g74290.1 68414.m08603 esterase/lipase/thioesterase family pro... 27 9.5
At1g73260.1 68414.m08478 trypsin and protease inhibitor family p... 27 9.5
>At1g24140.1 68414.m03045 matrixin family protein similar to matrix
metalloproteinase [Cucumis sativus] GI:7159629; contains
InterPro accession IPR001818: Matrixin
Length = 384
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +3
Query: 462 SGIQVYFASGNHGDGFPFDGPGRVVAPPFHRPSGIYILMMTKTW 593
S I + F SG HGDG PFDGP R +A F P+G + L + W
Sbjct: 217 SDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENW 260
>At1g70170.1 68414.m08074 matrixin family protein similar to
SP|P29136 Metalloendoproteinase 1 precursor (EC
3.4.24.-) (SMEP1) {Glycine max}; contains InterPro
accession IPR001818: Matrixin
Length = 378
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 462 SGIQVYFASGNHGDGFPFDGPGRVVAPPFHRPSGIYILMMTKTWGV 599
S I + F +G+HGDG PFDG +A F PSG + L + W V
Sbjct: 213 SDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVV 258
>At2g45040.1 68415.m05607 matrix metalloproteinase nearly identical
to metalloproteinase [Arabidopsis thaliana] GI:3128477;
contains InterPro accession IPR001818: Matrixin
Length = 342
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 468 IQVYFASGNHGDGFPFDGPGRVVAPPFHRPSGIYILMMTKTWGV 599
I++ F +G+HGDG PFDG V+A F +G L +TW V
Sbjct: 190 IKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAV 233
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 91 LLQYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKD 267
L QYGYL ++ S +A+ + Q GLP TG D T RCG D
Sbjct: 57 LQQYGYLPQNKES-----DDVSFEQALVRYQKNLGLPITGKPDSDTLSQILLPRCGFPD 110
>At4g16640.1 68417.m02515 matrix metalloproteinase, putative
metalloproteinase [Arabidopsis thaliana] GI:3128477;
contains InterPro accession IPR001818: Matrixin
Length = 364
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 468 IQVYFASGNHGDGFPFDGPGRVVAPPFHRPSGIYILMMTKTW 593
+++ F +G+HGDG PFDG +A F +G L +TW
Sbjct: 212 LKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETW 253
Score = 33.5 bits (73), Expect = 0.11
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 9/132 (6%)
Frame = +1
Query: 88 FLLQYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDVPTKQLFKRKRCGLKD 267
+L ++GY++ D + + + A+ Q GLP TG LD T L RCG+ D
Sbjct: 76 YLHRFGYVN-DGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTSTVTLMSLPRCGVSD 134
Query: 268 ----IDEDSHARNRRXIIQEG---WNKREVTYRL--LNGSSTMSKDRIERLLXNGLEVWA 420
I+ D G WN+ +TY + + ++ + ++ + W+
Sbjct: 135 THMTINNDFLHTTAHYTYFNGKPKWNRDTLTYAISKTHKLDYLTSEDVKTVFRRAFSQWS 194
Query: 421 PHGNLHFTKLDE 456
+ F ++D+
Sbjct: 195 SVIPVSFEEVDD 206
>At1g59970.1 68414.m06755 matrixin family protein similar to
SP|P29136 Metalloendoproteinase 1 precursor (EC
3.4.24.-) (SMEP1) {Glycine max}; contains InterPro
accession IPR001818: Matrixin
Length = 360
Score = 34.3 bits (75), Expect = 0.063
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 459 QSGIQVYFASGNHGDGFPFDGPGRVVAPPFHRPSGIYILMMTKTW 593
++ I + F SG HGDG PFDG +A P+G+ L + W
Sbjct: 200 RADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDW 244
>At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to villin
3 (VLN3) [Arabidopsis thaliana] GI:3415117
Length = 965
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 235 LFKRKRCGLKDIDEDSHARNRRXIIQEGWNKREVTYRLLNGSSTMSKDRIERL 393
L K++ GLK + + + + EG K EV Y N + +SKD + +L
Sbjct: 363 LLKQQGVGLKGLSKSTPVNEDIPPLLEGGGKLEVWYIDANSKTVLSKDHVGKL 415
>At2g18470.1 68415.m02151 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 633
Score = 29.1 bits (62), Expect = 2.4
Identities = 26/103 (25%), Positives = 39/103 (37%)
Frame = +3
Query: 237 IQKKKMRFERYR*RLARKKSQXYYTRRME*TRGHLQTPEWFKYNEQGSHRKASXEWFGGM 416
+++KK R + + + YY P W N QG +++++ W GG
Sbjct: 172 LRRKKKRKDSFYPEPMKGNQYQYYGNNNN-NNASQNYPNWH-LNSQGQNQQSTGGWGGGG 229
Query: 417 GAPREPPLHETR*RQSGIQVYFASGNHGDGFPFDGPGRVVAPP 545
+P PP T SG D + GP R V PP
Sbjct: 230 PSPPPPPRMPT------------SGE--DSSMYSGPSRPVLPP 258
>At5g62580.1 68418.m07855 expressed protein
Length = 615
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 497 MVAGSEINLYAALPSSSFVKWRFPWGAHTSK 405
M GS N LPS SF+K +F W H SK
Sbjct: 515 MSNGSSRNNCCLLPSGSFIKSKF-WKKHDSK 544
>At2g03480.2 68415.m00308 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase;
non-consensus GA donor site at exon 4
Length = 595
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 391 LLXNGLEVWAPHGNLHFTKLDEGKAAYKFISLPATMETGSP 513
++ N +++ A GNL+ LDEGK+A+ +P P
Sbjct: 448 MIRNVMDMHARFGNLNAALLDEGKSAWVMNVVPVNARNTLP 488
>At2g03480.1 68415.m00307 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase;
non-consensus GA donor site at exon 4
Length = 606
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 391 LLXNGLEVWAPHGNLHFTKLDEGKAAYKFISLPATMETGSP 513
++ N +++ A GNL+ LDEGK+A+ +P P
Sbjct: 459 MIRNVMDMHARFGNLNAALLDEGKSAWVMNVVPVNARNTLP 499
>At1g54420.1 68414.m06208 hypothetical protein
Length = 120
Score = 27.5 bits (58), Expect = 7.2
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -3
Query: 392 SLSMRSL--LIVLEPFRSL*VTSRLFHPSCIIXLRFLACESSSISFKPHLFLLNNCLVGT 219
S S RSL L+VL+ RSL +S S ++ L+ L C SSS S P L L+
Sbjct: 25 SSSARSLAPLLVLKLIRSLSSSSARLQASQLV-LKLL-CSSSSSSACPQALQLALKLLCW 82
Query: 218 SSTPVCGSPAKACIFLTAS 162
SS+ G A +F +S
Sbjct: 83 SSSSSTGPQAPQLVFKLSS 101
>At1g49580.1 68414.m05559 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium/calmodulin-dependent
protein kinase CaMK3 [Nicotiana tabacum]
gi|16904226|gb|AAL30820; contains protein kinase domain,
Pfam:PF00069; contains serine/threonine protein kinase
domain, INTERPRO:IPR002290
Length = 606
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 544 GGATTRPGPSKGNPSPWLP 488
GG T++P S G P+P+ P
Sbjct: 2 GGCTSKPSTSSGRPNPFAP 20
>At3g10560.1 68416.m01267 cytochrome P450, putative similar to
cytochrome P450 77A3 GB:O48928 [Glycine max]
Length = 514
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -3
Query: 551 VERGGHYSTRAIEGEPVSMVAGSEINLYAAL 459
+ERG ++TR +E + + SEI +++A+
Sbjct: 107 IERGAQFATRPVETPTRKIFSSSEITVHSAM 137
>At2g40130.1 68415.m04935 heat shock protein-related contains
similarity to 101 kDa heat shock protein; HSP101
[Triticum aestivum] gi|11561808|gb|AAC83689
Length = 491
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 125 PELATLTRHNLFPKLSRKCRPSQGYHK 205
P L TR +L K S KCRP +G+++
Sbjct: 442 PWLQMTTRTDLNQKSSAKCRPKKGWNQ 468
>At2g33520.1 68415.m04109 expressed protein
Length = 97
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 399 EWFGGMGAPREPPLHETR*RQSGIQVYFASGNHGDGFPF 515
+++GG G P PPL R Y+ G + FPF
Sbjct: 40 DYYGGYGQPHPPPLRPYR----SDHEYYGDGEYVGCFPF 74
>At1g74290.1 68414.m08603 esterase/lipase/thioesterase family
protein contains Interpro entry IPR000379
esterase/lipase/thioesterase family
Length = 371
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 330 RGHLQTPEWFKYNEQGSHRKASXEWFGGMGAPREPPL 440
RG+ + P W + +QG H + + G G PL
Sbjct: 260 RGYTRKPHWAEVRQQGIHESINRDMIVGFGNWEFDPL 296
>At1g73260.1 68414.m08478 trypsin and protease inhibitor family
protein / Kunitz family protein similar to trypsin
inhibitor propeptide [Brassica oleracea] GI:841208;
contains Pfam profile PF00197: Trypsin and protease
inhibitor
Length = 215
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +1
Query: 439 FTKLDE-GKAAYKFISLPATMETGSP 513
F K+++ G+ AYKF+ P T ++G+P
Sbjct: 149 FFKIEKSGEDAYKFVFCPRTCDSGNP 174
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,885,413
Number of Sequences: 28952
Number of extensions: 313298
Number of successful extensions: 736
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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