Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0188
         (376 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   1.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   1.3  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   1.3  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   1.3  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   1.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   5.4  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   5.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   7.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    20   7.2  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    20   7.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   9.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    20   9.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    20   9.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   9.5  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 181 SFFKRDLWRVLSDRQRLGSAP 243
           +FF R++WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 181 SFFKRDLWRVLSDRQRLGSAP 243
           +FF R++WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 181 SFFKRDLWRVLSDRQRLGSAP 243
           +FF R++WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 181 SFFKRDLWRVLSDRQRLGSAP 243
           +FF R++WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 181 SFFKRDLWRVLSDRQRLGSAP 243
           +FF R++WR +    +  S P
Sbjct: 386 NFFLREIWRTVKYHNKTSSVP 406


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 275 THHQVGRVLVCLQAQ*KKKTRGGARYPIRPIVS 373
           T   +  V +C Q   + + RG    P+ P+VS
Sbjct: 197 TSIDLNAVRLCFQVFLEGERRGKFTVPLTPVVS 229


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 235 SQAAAYHLILSTSLV*RRTCQCVRETPWR 149
           SQ+     +   SLV RR  +   E PWR
Sbjct: 219 SQSPEPESVRPLSLVVRRCEEPTEEKPWR 247


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = -2

Query: 372 LTIGRIGYRAPPRVFFFYCACRQTSTRPT*W*VVTSPMDF 253
           + + +I  R   +   F   CR  S R T W ++    D+
Sbjct: 663 IQVTKIIIRTDHQALKFLSRCRLLSERLTRWTLILGQYDY 702


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 263 GDVTTHHQVGRVL 301
           G  +T+HQ GR+L
Sbjct: 271 GGTSTNHQRGRIL 283


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 180 HVNAFGKHRGGELIP 136
           H++ F  HR  E+ P
Sbjct: 87  HIHIFDLHRNAEIYP 101


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +2

Query: 149 PPRCFPNALTCPSSNETCGE 208
           P RC  N  +CP+ +    E
Sbjct: 346 PHRCHGNLQSCPTRSHAVWE 365


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 241 PDIAEVHG*RNHSPS 285
           PDI+   G  N++PS
Sbjct: 119 PDISSTRGNNNNTPS 133


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 241 PDIAEVHG*RNHSPS 285
           PDI+   G  N++PS
Sbjct: 67  PDISSTRGNNNNTPS 81


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 241 PDIAEVHG*RNHSPS 285
           PDI+   G  N++PS
Sbjct: 250 PDISSTRGNNNNTPS 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,788
Number of Sequences: 336
Number of extensions: 2303
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)