Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0188
(376 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046) 31 0.40
SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.93
SB_20436| Best HMM Match : GED (HMM E-Value=4.5) 29 1.2
SB_20117| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_57913| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.8) 28 2.1
SB_1527| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.1
SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_39428| Best HMM Match : Glyco_hydro_9 (HMM E-Value=4.5) 27 5.0
SB_42282| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_8486| Best HMM Match : Granulin (HMM E-Value=0) 27 5.0
SB_18018| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_42707| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.7
SB_21442| Best HMM Match : p450 (HMM E-Value=0) 26 8.7
SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16) 26 8.7
>SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046)
Length = 811
Score = 30.7 bits (66), Expect = 0.40
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 268 RNHSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
+++SP+ P++ P+S K N P PN+P S
Sbjct: 642 KSNSPASNPKSNNPSSNPKPNNPASNPKPNNPSS 675
Score = 29.9 bits (64), Expect = 0.70
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P++ P S K N P PN+P S
Sbjct: 635 NNPSSNPKSNSPASNPKSNNPSSNPKPNNPAS 666
Score = 29.5 bits (63), Expect = 0.93
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 268 RNHSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++++PS P+ P S K N P PN+P S
Sbjct: 651 KSNNPSSNPKPNNPASNPKPNNPSSNPKPNNPSS 684
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P++ P+S K N P PN+P S
Sbjct: 575 NNPSSNPKSNNPSSNPKPNNPSSNPRPNNPSS 606
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 368 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 399
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 377 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 408
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 386 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPAS 417
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 395 NNPSSNPKPNNPSSNPKPNNPASNPKPNNPSS 426
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 422 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 453
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 431 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 462
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 440 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPAS 471
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 449 NNPSSNPKPNNPSSNPKPNNPASNPKPNNPAS 480
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 521 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPAS 552
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 530 NNPSSNPKPNNPSSNPKPNNPASNPKPNNPSS 561
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 671 NNPSSNPKPNNPSSNPKPNNPASNPKPNNPAS 702
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 779 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 810
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +1
Query: 214 SDRQRLGSAPDIAEVHG*RNHSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
+ +Q + + + + ++P+ P+ P S K N P PN+P S
Sbjct: 330 NSKQEIAAIETVFPASNPKPNNPASNPKPNNPASNPKPNNPSSNPKPNNPSS 381
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 404 NNPSSNPKPNNPASNPKPNNPSSNPKPNNPSS 435
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 458 NNPSSNPKPNNPASNPKPNNPASNPKPNNPSS 489
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 485 NNPSSNPKPNNPASNPKPNNPASNPKPNNPAS 516
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 539 NNPSSNPKPNNPASNPKPNNPSSNPKPNNPAS 570
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 680 NNPSSNPKPNNPASNPKPNNPASNPKPNNPSS 711
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 707 NNPSSNPKPNNPASNPKPNNPSSNPKPNNPAS 738
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 725 NNPSSNPKPNNPASNPKPNNPASNPKPNNPAS 756
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 566 NNPASNPKPNNPSSNPKSNNPSSNPKPNNPSS 597
Score = 27.9 bits (59), Expect = 2.8
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 268 RNHSPSGGPRARLPTSAIKKKNSRGGPVPNSP 363
++++PS P+ P+S + N P PN+P
Sbjct: 582 KSNNPSSNPKPNNPSSNPRPNNPSSNPKPNNP 613
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 359 NNPASNPKPNNPSSNPKPNNPSSNPKPNNPSS 390
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 413 NNPASNPKPNNPSSNPKPNNPSSNPKPNNPSS 444
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 476 NNPASNPKPNNPSSNPKPNNPASNPKPNNPAS 507
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 512 NNPASNPKPNNPSSNPKPNNPSSNPKPNNPSS 543
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 548 NNPASNPKPNNPSSNPKPNNPASNPKPNNPSS 579
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 662 NNPASNPKPNNPSSNPKPNNPSSNPKPNNPAS 693
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 698 NNPASNPKPNNPSSNPKPNNPASNPKPNNPSS 729
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 716 NNPASNPKPNNPSSNPKPNNPASNPKPNNPAS 747
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 770 NNPASNPKPNNPSSNPKPNNPSSNPKPNNPSS 801
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 467 NNPASNPKPNNPASNPKPNNPSSNPKPNNPAS 498
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 494 NNPASNPKPNNPASNPKPNNPASNPKPNNPSS 525
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 503 NNPASNPKPNNPASNPKPNNPSSNPKPNNPSS 534
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 689 NNPASNPKPNNPASNPKPNNPSSNPKPNNPAS 720
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 734 NNPASNPKPNNPASNPKPNNPASNPKPNNPAS 765
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 743 NNPASNPKPNNPASNPKPNNPASNPKPNNPAS 774
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 752 NNPASNPKPNNPASNPKPNNPASNPKPNNPSS 783
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 761 NNPASNPKPNNPASNPKPNNPSSNPKPNNPSS 792
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 277 SPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
+PS P+ P+S K N P NSP S
Sbjct: 618 NPSSNPKPNNPSSNPKPNNPSSNPKSNSPAS 648
>SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 29.5 bits (63), Expect = 0.93
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P++ P+S K N P PN+P S
Sbjct: 200 NNPSSNPKSNNPSSNPKPNNPSSNPKPNNPSS 231
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 191 NNPSSNPKPNNPSSNPKSNNPSSNPKPNNPSS 222
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 11 NNPSSNPKPNNPSSNPKPNNPASNPKPNNPSS 42
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 38 NNPSSNPKPNNPSSNPKPNNPASNPKPNNPSS 69
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 119 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 150
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 128 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 159
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 137 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 168
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 146 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 177
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 155 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 186
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 164 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 195
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 173 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 204
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 20 NNPSSNPKPNNPASNPKPNNPSSNPKPNNPSS 51
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 47 NNPSSNPKPNNPASNPKPNNPSSNPKPNNPAS 78
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 65 NNPSSNPKPNNPASNPKPNNPASNPKPNNPAS 96
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSP 363
++PS P+ P+S K N P PN+P
Sbjct: 218 NNPSSNPKPNNPSSNPKSNNPSSNPKPNNP 247
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 2 NNPASNPKPNNPSSNPKPNNPSSNPKPNNPAS 33
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 29 NNPASNPKPNNPSSNPKPNNPSSNPKPNNPAS 60
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 56 NNPASNPKPNNPSSNPKPNNPASNPKPNNPAS 87
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 110 NNPASNPKPNNPSSNPKPNNPSSNPKPNNPSS 141
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 74 NNPASNPKPNNPASNPKPNNPASNPKPNNPAS 105
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 83 NNPASNPKPNNPASNPKPNNPASNPKPNNPAS 114
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 92 NNPASNPKPNNPASNPKPNNPASNPKPNNPSS 123
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 101 NNPASNPKPNNPASNPKPNNPSSNPKPNNPSS 132
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 268 RNHSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++++PS P+ P+S K N P N+P S
Sbjct: 207 KSNNPSSNPKPNNPSSNPKPNNPSSNPKSNNPSS 240
>SB_20436| Best HMM Match : GED (HMM E-Value=4.5)
Length = 179
Score = 29.1 bits (62), Expect = 1.2
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 19 KKFLNYNASYYIPN**YLH*IKHFGI-LQQNNFNHLIIRLWNELPS 153
KK +YN N Y IKH + LQ +F L RLWNELP+
Sbjct: 78 KKVHSYNTRSSTSNNFY---IKHAKLQLQYKSFPRLGARLWNELPA 120
>SB_20117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 56 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPSS 87
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 65 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPAS 96
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 74 NNPSSNPKPNNPSSNPKPNNPASNPKPNNPSS 105
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 101 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPAS 132
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 110 NNPSSNPKPNNPSSNPKPNNPASNPKPNNPAS 141
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 146 NNPSSNPKPNNPSSNPKPNNPSSNPKPNNPAS 177
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P+S K N P PN+P S
Sbjct: 155 NNPSSNPKPNNPSSNPKPNNPASNPKPNNPSS 186
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 268 RNHSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++++P+ P+ P S K N P PN+P S
Sbjct: 27 KSNNPASNPKPNNPASNPKPNNPASNPKPNNPSS 60
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 83 NNPSSNPKPNNPASNPKPNNPSSNPKPNNPSS 114
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 119 NNPSSNPKPNNPASNPKPNNPASNPKPNNPSS 150
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P+ P S K N P PN+P S
Sbjct: 164 NNPSSNPKPNNPASNPKPNNPSSNPKPNNPAS 195
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 268 RNHSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++++P+ P++ P S K N P PN+P S
Sbjct: 18 KSNNPAFNPKSNNPASNPKPNNPASNPKPNNPAS 51
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 47 NNPASNPKPNNPSSNPKPNNPSSNPKPNNPSS 78
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 92 NNPASNPKPNNPSSNPKPNNPSSNPKPNNPSS 123
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 137 NNPASNPKPNNPSSNPKPNNPSSNPKPNNPSS 168
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P+S K N P PN+P S
Sbjct: 173 NNPASNPKPNNPSSNPKPNNPASNPKPNNPSS 204
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++PS P++ P K N P PN+P S
Sbjct: 11 NNPSSNPKSNNPAFNPKSNNPASNPKPNNPAS 42
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 38 NNPASNPKPNNPASNPKPNNPSSNPKPNNPSS 69
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 274 HSPSGGPRARLPTSAIKKKNSRGGPVPNSPYS 369
++P+ P+ P S K N P PN+P S
Sbjct: 128 NNPASNPKPNNPASNPKPNNPSSNPKPNNPSS 159
>SB_57913| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.8)
Length = 1101
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 266 HPWTSAMSGAEPSRCLSLNTLHKSR 192
+PW + G P RC S +T H+ R
Sbjct: 751 YPWGRSPIGQHPRRCASRDTAHRKR 775
>SB_1527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 266 HPWTSAMSGAEPSRCLSLNTLHKSR 192
+PW + G P RC S +T H+ R
Sbjct: 438 YPWGRSPIGQHPRRCASRDTAHRKR 462
>SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 27.9 bits (59), Expect = 2.8
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +1
Query: 97 LQQNNFNHLIIRLWNELPSTV 159
+Q+N+F+ + R+WNELP ++
Sbjct: 120 IQRNSFSRVGARVWNELPQSL 140
>SB_39428| Best HMM Match : Glyco_hydro_9 (HMM E-Value=4.5)
Length = 115
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 131 GYGMSSPPRCFPNALTCPSSNETCG 205
G+G++ P R + +CPS TCG
Sbjct: 33 GFGVNPPKRPHHGSSSCPSPPATCG 57
>SB_42282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 131 GYGMSSPPRCFPNALTCPSSNETCG 205
G+G++ P R + +CPS TCG
Sbjct: 490 GFGVNPPKRPHHGSSSCPSPPATCG 514
>SB_8486| Best HMM Match : Granulin (HMM E-Value=0)
Length = 878
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 158 CFPNALTCPSSNETCGE 208
C PN TC SS+ TC E
Sbjct: 385 CCPNGYTCNSSSGTCSE 401
>SB_18018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 26.6 bits (56), Expect = 6.5
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 287 PDGEWLRHPWTSAMSGAEPSRCLSLNTL-HKSRLKKDMSMRSGNTVEGSS 141
PD + L H T ++ S C +T+ HKSRLK+++S G T+ G +
Sbjct: 619 PDTQRLLHLSTCSLLLFSRSDCNVQDTIAHKSRLKEEVSKHLG-TIYGEA 667
>SB_42707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 281 GEWLRHPWTSAMSGAEPSRCLSLNTLHKSR 192
G L +PW + G +P RC S + H R
Sbjct: 80 GRNLCYPWGRSPIGQQPRRCASRDKTHGKR 109
>SB_21442| Best HMM Match : p450 (HMM E-Value=0)
Length = 565
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 296 RGPPDGEWLRHPWTSAMSGAEPSRCLSL 213
R P+ E RHP+T GA P +C+ +
Sbjct: 421 RFSPEQESTRHPFTYLPFGAGPRQCVGM 448
>SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16)
Length = 657
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 291 PT*W*VVTSPMDFSNVRGRAKPLPIT*YSPQVSF 190
P + V+T PMD S +R + +P YS F
Sbjct: 524 PNYYKVITHPMDLSTIRAKIQPQHFQHYSSITEF 557
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,901,241
Number of Sequences: 59808
Number of extensions: 271864
Number of successful extensions: 837
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 619783250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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