Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0187
         (381 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   2.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   4.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   4.2  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   4.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   4.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    20   7.3  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    20   7.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   9.6  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   9.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 164 YIFCGFLILL*NYFLHYEL 108
           ++FC F+ L   Y+++Y +
Sbjct: 145 FVFCYFIYLFTVYYIYYSV 163


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 56  FDSLITHTYKSIF*IC 103
           +DSL+ HT+  +  IC
Sbjct: 470 YDSLLWHTWMPVMRIC 485


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 227  KTPPRDP*A*HVHGFTASYEPAHFGE 304
            K  P +     +HG+T  Y+P  FG+
Sbjct: 1415 KLKPHESDVEPIHGYTIHYKP-EFGD 1439


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 112 NFCTYLKYRFVCMR 71
           N CT++ Y FV +R
Sbjct: 49  NLCTHILYAFVGLR 62


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 112 NFCTYLKYRFVCMR 71
           N CT++ Y FV +R
Sbjct: 49  NLCTHILYAFVGLR 62


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 136 YKTTSYTMNFCTYLKYRFV 80
           +K  +   N CT++ Y F+
Sbjct: 43  FKPQNINANLCTHVHYAFL 61


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 207 NKRSKERRHLHVILERNTFTASPLV 281
           N+R+K +R     LE+   +A PL+
Sbjct: 165 NRRAKAKRLQEAELEKLRLSARPLL 189


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 284 EPAHFGELGKGRRGELIHQCC 346
           EPA F +       EL HQ C
Sbjct: 17  EPATFSDAVLSSDEELFHQKC 37


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 106 CTYLKYRFVCMRN 68
           CT+L Y FV +R+
Sbjct: 50  CTHLLYAFVGLRD 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,408
Number of Sequences: 336
Number of extensions: 1294
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)