Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0186
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 351 2e-97
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 351 2e-97
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 308 4e-84
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 246 4e-75
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 213 1e-55
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 213 1e-55
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 197 8e-51
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 93 2e-19
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 93 2e-19
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 91 1e-18
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 91 1e-18
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 91 1e-18
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 9e-06
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 45 5e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 44 1e-04
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 43 2e-04
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 40 0.002
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.010
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 36 0.029
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.089
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.089
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.16
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.36
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.5
U55365-5|AAN84867.2| 350|Caenorhabditis elegans Serpentine rece... 29 3.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 28 7.7
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 351 bits (864), Expect = 2e-97
Identities = 167/190 (87%), Positives = 172/190 (90%)
Frame = +2
Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 250
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 251 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 430
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 431 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 610
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 611 DWLQPSCCRF 640
P F
Sbjct: 181 IGYNPKAVPF 190
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +3
Query: 606 RKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQV 719
+KIGYNP AV FVPISG++GDNMLE S+ MPWFKGW V
Sbjct: 179 KKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAV 216
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 351 bits (864), Expect = 2e-97
Identities = 167/190 (87%), Positives = 172/190 (90%)
Frame = +2
Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 250
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 251 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 430
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 431 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 610
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 611 DWLQPSCCRF 640
P F
Sbjct: 181 IGYNPKAVPF 190
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +3
Query: 606 RKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQV 719
+KIGYNP AV FVPISG++GDNMLE S+ MPWFKGW V
Sbjct: 179 KKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAV 216
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 308 bits (755), Expect = 4e-84
Identities = 151/189 (79%), Positives = 160/189 (84%)
Frame = +2
Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 250
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 251 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 430
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 431 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 610
GEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQRLFHLSQSP 177
Query: 611 DWLQPSCCR 637
D + +C R
Sbjct: 178 DSTETTCLR 186
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 655 DGTETTCWSLQPKCLGSRDG 714
D TETTC C GSRDG
Sbjct: 178 DSTETTCLRSPRTCHGSRDG 197
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 246 bits (602), Expect(2) = 4e-75
Identities = 113/117 (96%), Positives = 116/117 (99%)
Frame = +2
Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 250
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 251 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 421
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +3
Query: 606 RKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQV 719
+KIGYNP AV FVPISG++GDNMLE S+ MPWFKGW V
Sbjct: 145 KKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAV 182
Score = 53.6 bits (123), Expect(2) = 4e-75
Identities = 25/43 (58%), Positives = 28/43 (65%)
Frame = +2
Query: 512 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKDWLQPSCCRF 640
L+V NKMDSTEPP+SE RF EI EVS +IKK P F
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPF 156
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 213 bits (520), Expect = 1e-55
Identities = 99/177 (55%), Positives = 131/177 (74%)
Frame = +2
Query: 80 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 259
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 260 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 439
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 440 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 610
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ +
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTR 341
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 213 bits (520), Expect = 1e-55
Identities = 99/177 (55%), Positives = 131/177 (74%)
Frame = +2
Query: 80 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 259
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 260 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 439
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 440 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 610
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ +
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTR 359
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 197 bits (480), Expect = 8e-51
Identities = 88/184 (47%), Positives = 128/184 (69%)
Frame = +2
Query: 74 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 253
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 254 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 433
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 434 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKD 613
EFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 614 WLQP 625
P
Sbjct: 284 GFNP 287
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 250
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 251 DKLKAER 271
DKLK +
Sbjct: 61 DKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 92.7 bits (220), Expect = 2e-19
Identities = 61/157 (38%), Positives = 86/157 (54%), Gaps = 2/157 (1%)
Frame = +2
Query: 83 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 256
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 257 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 436
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 437 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 547
E QT+EH +LA +GVK + + +NK D E
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 92.7 bits (220), Expect = 2e-19
Identities = 61/157 (38%), Positives = 86/157 (54%), Gaps = 2/157 (1%)
Frame = +2
Query: 83 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 256
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 257 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 436
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 437 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 547
E QT+EH +LA +GVK + + +NK D E
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 90.6 bits (215), Expect = 1e-18
Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Frame = +2
Query: 77 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 256
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 257 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 436
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 437 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 568
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 186
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 90.6 bits (215), Expect = 1e-18
Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Frame = +2
Query: 77 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 256
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 257 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 436
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 437 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 568
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 90.6 bits (215), Expect = 1e-18
Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Frame = +2
Query: 77 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 256
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 257 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 436
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 437 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 568
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 59.7 bits (138), Expect = 2e-09
Identities = 47/148 (31%), Positives = 67/148 (45%)
Frame = +2
Query: 95 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 274
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 275 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 454
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 455 KNGQTREHALLAFTLGVKQLIVGVNKMD 538
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 56.0 bits (129), Expect = 3e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Frame = +2
Query: 95 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 274
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 275 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 454
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 455 KNGQTREHALLAFTLGVKQLIVGVNKMD 538
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +2
Query: 95 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 274
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 275 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 433
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect(2) = 9e-06
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +2
Query: 218 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 394
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 395 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 538
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 9e-06
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 98 IVVIGHVDSGKST 136
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 45.2 bits (102), Expect = 5e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 223
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 224 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 391
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 392 QADCAVLIVAAGTG 433
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 44.8 bits (101), Expect = 6e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 71 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 223
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 224 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 391
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 392 QADCAVLIVAAGTG 433
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 44.0 bits (99), Expect = 1e-04
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 12/207 (5%)
Frame = +2
Query: 14 RNSARGGYYTQ-FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKR 181
+ + G +T+ ++IRD P K+ + V+G+VD+GKST G L + G R
Sbjct: 115 KQTGGGSLFTEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAAR 173
Query: 182 TIEKFEKEAQEMGKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIID 343
T K E G+ S +L + + +D + +K VT ID
Sbjct: 174 TKLFRHKHEFESGRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFID 232
Query: 344 APGHRDFIKNMITGTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 517
GH ++K I G + D +L++ A G G T+EH LA +L V +
Sbjct: 233 LAGHEKYLKTTIFGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYL 285
Query: 518 VGVNKMDSTEPPYSEPRFEEIKKEVSS 598
V V K+D E + I + V S
Sbjct: 286 V-VTKIDMCPANILEETMKNITRLVRS 311
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 43.2 bits (97), Expect = 2e-04
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Frame = +2
Query: 92 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 271
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 272 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 448
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 449 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 598
I QT EH LLA ++I+ +NK D E ++++K + S
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAEKSKISESAKKVRKGLKS 156
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 39.5 bits (88), Expect = 0.002
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 13/208 (6%)
Frame = +2
Query: 14 RNSARGGYYTQ-FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKR 181
+ + G +T+ ++IRD P K+ + V+G+VD+GKST G L + G R
Sbjct: 115 KQTGGGSLFTEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAAR 173
Query: 182 TIEKFEKEAQEMGKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIID 343
T K E G+ S +L + + +D + +K VT ID
Sbjct: 174 TKLFRHKHEFESGRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFID 232
Query: 344 APGHRDFIKNMITGTSQ---ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 514
GH ++K I G + + +L++ A G G T+EH LA +L V
Sbjct: 233 LAGHEIYLKTTIFGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVY 285
Query: 515 IVGVNKMDSTEPPYSEPRFEEIKKEVSS 598
+V V K+D E + I + V S
Sbjct: 286 LV-VTKIDMCPAYILEETMKNITRLVRS 312
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 77 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 253
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 254 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 418
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 77 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 253
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 254 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 418
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +2
Query: 326 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 505
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 506 KQLIVGVNKMDSTEPPYSEPRFEEI 580
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 35.9 bits (79), Expect = 0.029
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 8/197 (4%)
Frame = +2
Query: 44 QFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEM 217
+ ++R P+ ++ + + V+G D GKST G L C G K I F + E+
Sbjct: 154 EVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEV 211
Query: 218 GKGSFKYAWVLDKLKAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITG 385
G K + V + + RG ++ A E S VT+ID G + K I G
Sbjct: 212 RTG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269
Query: 386 TS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYS 559
+ A L+VAA + GI+ TREH L L + ++ + KMD +
Sbjct: 270 LTGYTPHFACLVVAA-----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD---- 317
Query: 560 EPRFEEIKKEVSSYIKK 610
++I K+VS+ + K
Sbjct: 318 RQGLKKIIKDVSNLVAK 334
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.089
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 95 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 274
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 275 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 433
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.089
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +2
Query: 95 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 274
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 275 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 433
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 531 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 403
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +2
Query: 335 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 514
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 515 IVGVNKMDSTEPPYSEPR 568
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 173 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 274
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 173 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 274
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>U55365-5|AAN84867.2| 350|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 11 protein.
Length = 350
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 552 HTVSPDLRKSRRKYPHTSRKIGYNPAAVAFVPISGWHGDNM 674
H +S K +R T RKIG+N A V P+ G M
Sbjct: 277 HIISYCCEKWKRHLSATWRKIGFNSATVQVAPLCDTFGSEM 317
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 92 INIVVIGHVDSGKSTTT 142
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 4.4
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 514 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 356
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 355 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 236
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 591 YPHTSRKIGYNPAAVAFVPISGWHGDNM 674
YPH +GY +A V GWH +++
Sbjct: 473 YPHPPGTVGYPDVQIAPVDYPGWHPNDI 500
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 591 YPHTSRKIGYNPAAVAFVPISGWHGDNM 674
YPH +GY +A V GWH +++
Sbjct: 515 YPHPPGTVGYPDVQIAPVDYPGWHPNDI 542
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 329 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 424
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 591 YPHTSRKIGYNPAAVAFVPISGWHGDNM 674
YPH +GY +A V GWH +++
Sbjct: 515 YPHPPGTVGYPDVQIAPVDYPGWHPNDI 542
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,310,260
Number of Sequences: 27780
Number of extensions: 365872
Number of successful extensions: 1159
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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