Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0185
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   6.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.5  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = -1

Query: 540 VDTRTRYLLQTFKIYLV*IESAHLVFTSLMVVDVFVHG 427
           +DTR+ + ++ FK   V +  AH +    + +++  +G
Sbjct: 9   IDTRSTHSMKNFKYLKVLVTFAHFICLFPITINIRKNG 46


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -1

Query: 552 KL*YVDTRTRYLLQTFKIYLV*IESAHLVFTSLMVVDVFVHGYMDG 415
           KL  +   TR   +  +I ++ + + HLV   L   D+F +G   G
Sbjct: 111 KLSEIKENTRLAEKQARISILELVAVHLVLAFLYSFDLFANGITFG 156


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 220 VPIPQPYPVHVTVEQP 267
           VP P+P P   T  +P
Sbjct: 396 VPTPEPQPTQTTESEP 411


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 708 CIILILFCIY 679
           C+++IL CIY
Sbjct: 230 CVLIILLCIY 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,486
Number of Sequences: 336
Number of extensions: 3911
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)