Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0181
         (370 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   1.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   1.7  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   5.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   5.3  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 113 TYFSNY*RPALASLRKNCNLLLIF 42
           TYF    R  +    K CN +++F
Sbjct: 305 TYFGKTGRKTVLKTNKYCNFIILF 328


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 105 KIRFFLRQTLPILLP 149
           KI FFLR    I+LP
Sbjct: 134 KIHFFLRSLFAIMLP 148


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +3

Query: 276 INFYNSQDSHPHSQGTTSVGRPP 344
           +++YNS + + H Q   +    P
Sbjct: 2   VSYYNSTNMYRHQQAVAAPANAP 24


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = +3

Query: 276 INFYNSQDSHPHSQGTTSVGRPP 344
           +++YNS + + H Q   +    P
Sbjct: 2   VSYYNSTNMYRHQQAVAAPANAP 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,422
Number of Sequences: 336
Number of extensions: 1633
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)