Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0178
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.7  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   5.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.9  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.9  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 294 STGSTPVPGDKN 329
           ST   PVPGDKN
Sbjct: 4   STKIFPVPGDKN 15


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 294 STGSTPVPGDKN 329
           ST   PVPGDKN
Sbjct: 4   STKIFPVPGDKN 15


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 369 LWHFDVFFDREVNSFYHRVRVWNRY 295
           +W  D FF  E  S++H     N +
Sbjct: 122 IWVPDTFFVNEKQSYFHIATTSNEF 146


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 383 GLGMYSGTLMYSLTGK*TVFI 321
           G  + +GTL++++ G  TV++
Sbjct: 348 GFFLINGTLLHTIVGAVTVYL 368


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 383 GLGMYSGTLMYSLTGK*TVFI 321
           G  + +GTL++++ G  TV++
Sbjct: 173 GFFLINGTLLHTIVGAVTVYL 193


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 13/53 (24%), Positives = 21/53 (39%)
 Frame = +3

Query: 255 TSTGGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARVHSQAVPGHETRTRT 413
           ++ GG   ++    +   PVPG     LP   +H S   +       + R RT
Sbjct: 22  STCGGSSSSMAYLKSAPYPVPGLGLHGLPVDSLHSSMAGYPAGNQRKQRRERT 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.138    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,854
Number of Sequences: 336
Number of extensions: 2970
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)