Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0178
(712 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30416| Best HMM Match : Prosystemin (HMM E-Value=2.2) 37 0.014
SB_52076| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_34661| Best HMM Match : Fz (HMM E-Value=0.00016) 31 0.70
SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34) 31 0.92
SB_11521| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_26512| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_20072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_37510| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 28 6.5
SB_34063| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 28 8.6
SB_51055| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 28 8.6
>SB_30416| Best HMM Match : Prosystemin (HMM E-Value=2.2)
Length = 455
Score = 37.1 bits (82), Expect = 0.014
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 6/137 (4%)
Frame = +3
Query: 237 PRRKTHTSTGG-EKRALPR*STGSTPVPGDK---NCSLPGQRIHQSARVHSQAVPGHETR 404
PR T++ G + A PR S+ T + N +L G ++ S+ HS+ +PG + +
Sbjct: 222 PRHPTNSPRGSVSEAASPRNSSTETSPRNSRTEMNINLSGGQLKTSSEAHSRKMPGGQPK 281
Query: 405 TRTGQSARRQSG--AC*SIRTRASSS*KGRAGTRQSACTAPVPSRKKSTLPS*GSSEGSR 578
+ R + A + RT GR T +S T P + LPS + GS
Sbjct: 282 YGVPGNRRPAASKYAAMAARTHVPPKVMGRDTTAKSP-TYPHRDAHRDILPSRSTYGGSY 340
Query: 579 AVPGREDHPLPCEGTSR 629
P R+ H E ++
Sbjct: 341 KEPVRQKHVHKMESNAK 357
>SB_52076| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +2
Query: 284 TPLKYRFHTRTR**KLFTSRSKNTSKCQSTFPSRTRSRNTYPYRSKCTSTIRCLLEYTNT 463
TP + T+ ++ + + + + +T PS + NT P + +T L Y NT
Sbjct: 196 TPSLAMYPNTTQSLAMYPNTTPSLAMYPNTTPSLAMNPNTTPSLAMYPNTTPSLAMYPNT 255
Query: 464 CQFQLKRPCRYPSKCLYRTRTQ*KKKYPS 550
Q P PS +Y TQ YP+
Sbjct: 256 TQSLAMYPNTTPSLAMYPNTTQSLAMYPN 284
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/89 (23%), Positives = 36/89 (40%)
Frame = +2
Query: 284 TPLKYRFHTRTR**KLFTSRSKNTSKCQSTFPSRTRSRNTYPYRSKCTSTIRCLLEYTNT 463
TP + T+ ++ + +++ + +T PS N P + +T + L Y NT
Sbjct: 266 TPSLAMYPNTTQSLAMYPNTTQSLAMYPNTTPSLAMYPNITPSLNMYANTTQSLAMYPNT 325
Query: 464 CQFQLKRPCRYPSKCLYRTRTQ*KKKYPS 550
P PS +Y TQ YP+
Sbjct: 326 TPSLAMYPNTTPSLAMYPNTTQPLAMYPN 354
>SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/81 (19%), Positives = 37/81 (45%)
Frame = -2
Query: 639 DGVVDWYLHRVMDDLLYRVRHVNLHWNLNWEGYFFFYWVRVRYRHFDGYRHGLFNWNWHV 460
D VV + +D +YR RH ++ + Y+++Y+ Y ++ Y H + + ++
Sbjct: 81 DDVVGHEVIVKIDHTVYRQRHAYYYYYYYYYYYYYYYYYYYYYYYYYYYYHHYYYYYYYY 140
Query: 459 FVYSNRHRIVDVHFDRYGYVF 397
+ Y + ++ Y Y +
Sbjct: 141 YYYYYYYYYYYYYYYYYYYYY 161
>SB_34661| Best HMM Match : Fz (HMM E-Value=0.00016)
Length = 486
Score = 31.5 bits (68), Expect = 0.70
Identities = 26/85 (30%), Positives = 34/85 (40%)
Frame = +3
Query: 261 TGGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARVHSQAVPGHETRTRTGQSARRQSG 440
TG + R L T S +PG SL GQ + + + G + RT TGQ R +G
Sbjct: 386 TGQDTRTLTGQDTRS--LPGQDTRSLTGQDMRALTGQDIRTLTGQDIRTLTGQDTRSLTG 443
Query: 441 AC*SIRTRASSS*KGRAGTRQSACT 515
IRT + G A T
Sbjct: 444 Q--DIRTLTGQDTRSLTGQDMRALT 466
Score = 31.1 bits (67), Expect = 0.92
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +3
Query: 231 AVPRRKTHTSTGGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARVHSQAVPGHETRTR 410
A+ + T TG + R+L T + + G SLPGQ +A+ G + RT
Sbjct: 368 ALTGQDIRTLTGQDIRSLTGQDTRT--LTGQDTRSLPGQDTRSLTGQDMRALTGQDIRTL 425
Query: 411 TGQSARRQSG 440
TGQ R +G
Sbjct: 426 TGQDIRTLTG 435
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = +2
Query: 224 FLCRTP*KNTYQYRWRKTCPTPLKYRFHTRTR**KLFTSRSKNTSKCQSTFPSRTRSRNT 403
F R +TY+ R+ T T + + TR TSR++ + ++ + R+R +
Sbjct: 245 FALRGGYSHTYRTRYSLTYRTRYSHTYRTRYS----LTSRTRYSLTYRTRYARTYRTRYS 300
Query: 404 YPYRSKCTSTIRCLLEYT 457
+ YR++ + T R +T
Sbjct: 301 HTYRTRYSHTYRTRYSHT 318
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +2
Query: 233 RTP*KNTYQYRWRKTCPTPLKYRFHTRTR**KLFTSRSKNTSKCQSTFPSRTRSRNTYPY 412
RT +TY+ R+ T T +Y RTR + + +R +T + + + RTR +TY
Sbjct: 264 RTRYSHTYRTRYSLTSRT--RYSLTYRTRYARTYRTRYSHTYRTRYSHTYRTRYSHTYRT 321
Query: 413 RSKCTSTIRCLLEYTNTCQ 469
T R L Y T Q
Sbjct: 322 IYLHTYRTRYSLTYRLTGQ 340
>SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34)
Length = 1197
Score = 31.1 bits (67), Expect = 0.92
Identities = 30/117 (25%), Positives = 44/117 (37%)
Frame = +3
Query: 237 PRRKTHTSTGGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARVHSQAVPGHETRTRTG 416
P T+ G P + STP G + S PG + ++ + PG + T G
Sbjct: 971 PAAAPSTTPGAAPSTTPGAESSSTP--GAASSSTPGAALSRTPGAAPSSTPGAASSTTPG 1028
Query: 417 QSARRQSGAC*SIRTRASSS*KGRAGTRQSACTAPVPSRKKSTLPS*GSSEGSRAVP 587
+ GA S A+SS + A ++ P S+ P SS RA P
Sbjct: 1029 AAPSSTPGAAMSSIPGATSS------STPGAASSSTPGAAPSSTPGAASSITRRADP 1079
>SB_11521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 31.1 bits (67), Expect = 0.92
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +3
Query: 204 HHCCQKGSCAVPRRKTHTSTGGEKRALPR*STGSTP--VPGDKNCSLPGQRIHQSARVHS 377
HH + VP TH G +P G+TP VPG+ PG + + +
Sbjct: 430 HHVPGNTTHHVPGNTTHHVPGNTTHHVP----GNTPHHVPGNTTPQEPGNTPNHVPGITT 485
Query: 378 QAVPGHETRTRTGQSAR 428
Q +PG+ T G + R
Sbjct: 486 QHIPGYTTHHVPGYATR 502
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +3
Query: 234 VPRRKTHTSTGGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARVHSQAVPGHETRTRT 413
VP KTH G +P +T VPG+ +PG H + VPG+ T
Sbjct: 344 VPGNKTHHVPGYTTHHVPGNTTHH--VPGNTTHHVPGNTTHHVPGNTTHHVPGNTTHHVP 401
Query: 414 GQSARRQSG 440
G + SG
Sbjct: 402 GNTTHHVSG 410
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/79 (26%), Positives = 30/79 (37%)
Frame = +3
Query: 204 HHCCQKGSCAVPRRKTHTSTGGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARVHSQA 383
HH + VP TH G +P +T VPG+ +PG H + +
Sbjct: 358 HHVPGNTTHHVPGNTTHHVPGNTTHHVPGNTTHH--VPGNTTHHVPGNTTHHVSGYTTHH 415
Query: 384 VPGHETRTRTGQSARRQSG 440
VPG+ T G + G
Sbjct: 416 VPGNTTHHVPGNTTHHVPG 434
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = +3
Query: 204 HHCCQKGSCAVPRRKTHTSTGGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARVHSQA 383
HH + VP TH G +P +T VPG+ +PG HQ + +
Sbjct: 717 HHVPGYTTHQVPGYTTHHVPGYTTHHVPGNTTHH--VPGNTTHHVPGNTTHQVSGYTTHQ 774
Query: 384 VPGHETRTRTGQSARRQSG 440
VPG+ T G + G
Sbjct: 775 VPGYTTHHVPGYTTHHVPG 793
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/79 (26%), Positives = 28/79 (35%)
Frame = +3
Query: 204 HHCCQKGSCAVPRRKTHTSTGGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARVHSQA 383
HH + VP TH G +P +T VPG+ +PG H
Sbjct: 406 HHVSGYTTHHVPGNTTHHVPGNTTHHVPGNTTHH--VPGNTTHHVPGNTTHHVPGNTPHH 463
Query: 384 VPGHETRTRTGQSARRQSG 440
VPG+ T G + G
Sbjct: 464 VPGNTTPQEPGNTPNHVPG 482
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/85 (27%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Frame = +3
Query: 204 HHCCQKGSCAVPRRKTHTSTGGEKRALPR*STGSTP------VPGDKNCSLPGQRIHQSA 365
HH + VP TH G +P +T P VPG+ +PG H
Sbjct: 557 HHVPGNTTHHVPGYTTHHVPGNTTHHVPGYATHHVPGYTTHHVPGNTTHHVPGYTTHHVP 616
Query: 366 RVHSQAVPGHETRTRTGQSARRQSG 440
VPG+ T G +A G
Sbjct: 617 GYTVHHVPGNTTHHVPGNTAHHVPG 641
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/79 (26%), Positives = 30/79 (37%)
Frame = +3
Query: 204 HHCCQKGSCAVPRRKTHTSTGGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARVHSQA 383
HH + VP TH +G +P +T VPG+ +PG H +
Sbjct: 390 HHVPGNTTHHVPGNTTHHVSGYTTHHVPGNTTHH--VPGNTTHHVPGNTTHHVPGNTTHH 447
Query: 384 VPGHETRTRTGQSARRQSG 440
VPG+ T G + G
Sbjct: 448 VPGNTTHHVPGNTPHHVPG 466
>SB_26512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 240 RRKTHTST----GGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARVHSQAVPGHETRT 407
R+KT T GG+ + + + S VPG+K+ +P ++ Q S+ VP +++
Sbjct: 188 RKKTGNETCKEQGGKAKKMSKKDKKSKQVPGEKSKQVPDKKSKQVPGEKSKQVPDKKSKQ 247
Query: 408 RTGQSARRQS 437
G+ +++ S
Sbjct: 248 VPGEKSKQVS 257
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 219 KGSCAVPRRKTHTSTGGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARVHSQAVPGHE 398
K S VP K+ + + +P S VP K+ +PG++ Q + S+ VPG +
Sbjct: 211 KKSKQVPGEKSKQVPDKKSKQVP--GEKSKQVPDKKSKQVPGEKSKQVSDKKSKQVPGKK 268
Query: 399 TRTRTGQSARRQSG 440
++ + +++ SG
Sbjct: 269 SKQVPDEKSKQASG 282
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +3
Query: 210 CCQKGS---CAVPRRKTHTSTGGEKRALPR*STGSTP 311
CC G CA R T TST GEK A P G P
Sbjct: 1711 CCSNGCRRLCADAERATTTSTRGEKDAEPAFQEGRCP 1747
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 3.7
Identities = 26/93 (27%), Positives = 39/93 (41%)
Frame = +3
Query: 309 PVPGDKNCSLPGQRIHQSARVHSQAVPGHETRTRTGQSARRQSGAC*SIRTRASSS*KGR 488
P PG LPGQ+ Q+ G T T S+ + R + +G+
Sbjct: 742 PPPGQ----LPGQQPGQAGGRPGLNPQGQVTTATTAPSSNPNESTTPTTGGRPGLNPQGQ 797
Query: 489 AGTRQSACTAPVPSRKKSTLPS*GSSEGSRAVP 587
T A TAP + +ST P+ G + G+ A+P
Sbjct: 798 VTT---ATTAPSSNPNESTTPTTGPTTGTTALP 827
>SB_20072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 109 QLEPKKQDKRGLSEYYGSYDEHGGGHE 189
Q EP ++DKR S + GS GGG E
Sbjct: 43 QFEPGERDKRNSSIFLGSNKNEGGGTE 69
>SB_37510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 326 KLFTSRSKNTSKCQSTFPSRTR-SRNTYPYRSKCTS 430
K FT+R+K T+ +T PS T+ +RN + CTS
Sbjct: 121 KNFTTRTKTTTSETTTTPSTTKNNRNNTATSNNCTS 156
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 269 RKTCPTPLKYRFHTRTR**KLFTSRSKNTSKCQSTFPSRTRSRNTYPYRSKCTSTIR 439
R +P R +R+R SRS++ S+ +S SR+RSR++ RS+ S R
Sbjct: 33 RGKAQSPSGSRSRSRSRSRSQSQSRSRSRSRSRSRSRSRSRSRSSSRSRSRSRSRSR 89
>SB_34063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 27.9 bits (59), Expect = 8.6
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 359 KCQS-TFPSR-TRSRNTYPYRSKCT-STIRCLLEYTNTCQFQLKRPCRYPSKCLYRTRTQ 529
KCQ FP R S R K + S+ R +L+Y + + LK PCR C Y TR
Sbjct: 749 KCQCRVFPCRGVYSTRVVACRVKVSVSSWRVVLKYNVSWRVVLKYPCRLGVSC-YSTRV- 806
Query: 530 *KKKYP 547
KYP
Sbjct: 807 -VLKYP 811
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 601 IHYPVKVPVDNPIPVYVDKPVPVH 672
+ P +VPV P+PV V PVP+H
Sbjct: 221 VRVPFRVPVRVPVPVRV--PVPIH 242
>SB_51055| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 456
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 381 LGNVLWHFDVFFDREVNSFYHRVRVWNRY 295
L + LW D +F+ EV H + + N+Y
Sbjct: 127 LSDSLWQPDTYFENEVQGKIHELTIKNKY 155
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.138 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,283,689
Number of Sequences: 59808
Number of extensions: 383778
Number of successful extensions: 1168
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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