Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0178
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    30   0.082
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   4.1  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    24   5.4  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   7.2  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 29.9 bits (64), Expect = 0.082
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 598 IIHYPVKVPVDNPIPVYVDKPVPVHI 675
           +I  PV   V+ P P+ V+KP PV +
Sbjct: 219 VIEKPVPYTVEKPYPIEVEKPFPVEV 244



 Score = 28.7 bits (61), Expect = 0.19
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 601 IHYPVKVPVDNPIPVYVDKPVP 666
           +  P+K+P+   IP  ++KPVP
Sbjct: 204 VEQPIKIPIYKVIPKVIEKPVP 225



 Score = 23.8 bits (49), Expect = 5.4
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +1

Query: 601 IHYPVKVPVDNPIPVYVDKPVPVHI 675
           + +PV + V + + VY+ +P P+ +
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYPLQV 202



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 613 VKVPVDNPIPVYVDKPVPVHI 675
           V VPV +P+P+ V   V V+I
Sbjct: 174 VGVPVPHPVPIAVPHYVKVYI 194


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 598 IIHYPVKVPVDNPIPVYVDKPVPV 669
           ++ YP+ +P+  PIPV    P+PV
Sbjct: 629 LVPYPIIIPLPLPIPV----PIPV 648


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 369 LWHFDVFFDREVNSFYHRVRVWNR 298
           +W  D FF  + NSF H V   N+
Sbjct: 97  IWVPDTFFANDKNSFLHDVTERNK 120


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +2

Query: 512 YRTRTQ*KKKYPS 550
           YRT TQ K KYPS
Sbjct: 90  YRTVTQLKSKYPS 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.138    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,240
Number of Sequences: 2352
Number of extensions: 12625
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)