Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0178
(712 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein. 32 2.3
BC035914-1|AAH35914.1| 506|Homo sapiens CCDC88C protein protein. 31 3.1
AB040942-1|BAA96033.1| 1326|Homo sapiens KIAA1509 protein protein. 31 3.1
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 30 7.1
AK075319-1|BAC11545.1| 605|Homo sapiens protein ( Homo sapiens ... 30 9.4
AB075509-1|BAE45756.1| 298|Homo sapiens putative protein produc... 30 9.4
>AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein.
Length = 2469
Score = 31.9 bits (69), Expect = 2.3
Identities = 40/152 (26%), Positives = 59/152 (38%), Gaps = 12/152 (7%)
Frame = +3
Query: 228 CAVPRRKTHTSTGGEK----RALPR*STGSTPVPGDKN-CSLPGQRIHQSARVHSQAVPG 392
C PR+K+H +G E+ R P T P G K PG S ++H +
Sbjct: 1039 CQPPRKKSHRVSGKERPNHSRGDPSHVTQPPPAQGSKEVLRAPGS--PHSQQLHPPSPTE 1096
Query: 393 HETRTRTGQSARRQSGAC-*SIRTRASSS*KGRAGTRQSACTAPVPSRKKSTLPS*GSSE 569
HE +T S R A + + + +GR R+ +P S KS G
Sbjct: 1097 HEVDVKTPASKPRPDQAREDELHPKQAEKREGRRWRREPTVDSPSHSEGKSNKKR-GKLR 1155
Query: 570 GSRAVPGREDHPLP------CEGTSRQPHPSL 647
G R RE+ LP +G +P P++
Sbjct: 1156 GRRL---REESILPVSADVISDGRGSRPSPAM 1184
>BC035914-1|AAH35914.1| 506|Homo sapiens CCDC88C protein protein.
Length = 506
Score = 31.5 bits (68), Expect = 3.1
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +3
Query: 384 VPGHE---TRTRTGQSARRQSGAC*SIRTRASSS*-KGRAGTRQSACTAPVPSRKKSTLP 551
VP H +R + +S+R S + + SS GR+ + S +PSR +TLP
Sbjct: 84 VPNHRQYVSRPSSLESSRNTSSNSSPLNLKGSSEQLHGRSESFSSEDL--IPSRDLATLP 141
Query: 552 S*GSSEGSRAVPGREDHPLPCEG 620
S+ G A+ GR ++PLP G
Sbjct: 142 REASTPGRNAL-GRHEYPLPRNG 163
>AB040942-1|BAA96033.1| 1326|Homo sapiens KIAA1509 protein protein.
Length = 1326
Score = 31.5 bits (68), Expect = 3.1
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +3
Query: 384 VPGHE---TRTRTGQSARRQSGAC*SIRTRASSS*-KGRAGTRQSACTAPVPSRKKSTLP 551
VP H +R + +S+R S + + SS GR+ + S +PSR +TLP
Sbjct: 858 VPNHRQYVSRPSSLESSRNTSSNSSPLNLKGSSEQLHGRSESFSSEDL--IPSRDLATLP 915
Query: 552 S*GSSEGSRAVPGREDHPLPCEG 620
S+ G A+ GR ++PLP G
Sbjct: 916 REASTPGRNAL-GRHEYPLPRNG 937
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 31.1 bits (67), Expect = 4.1
Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Frame = -2
Query: 675 YMHGHWFININWDGVVDWYLHRVMDDLLYRVRHVNLHWNLNWEGYFFFYWVRVRYRHFD- 499
+MH H IN + + ++H Y H ++H N Y + + +R Y H
Sbjct: 282 HMHSHAHINTHTHAHIHMHMHTHTHTHTYTHAHAHIHINTYMHTYTYTH-IRT-YTHIQM 339
Query: 498 ---GYRHGLFNWNWHVFVYSNRHRIVDVHFDRYGYVF 397
+ H + + H++VY++ H H + + +
Sbjct: 340 HTLTWTHIHTHTHIHIYVYTHTHMHTPTHIYAHRHTY 376
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 30.3 bits (65), Expect = 7.1
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 3/126 (2%)
Frame = +3
Query: 258 STGGEKRALPR*STGSTPVPGDKNCSLPGQRIHQSARV---HSQAVPGHETRTRTGQSAR 428
S+ R++ S S+ +P + S H S+ HS + P + T + S+
Sbjct: 37 SSSSSSRSILSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSS 96
Query: 429 RQSGAC*SIRTRASSS*KGRAGTRQSACTAPVPSRKKSTLPS*GSSEGSRAVPGREDHPL 608
S + + +SSS + + S+ ++ PS S+ PS SS S + P
Sbjct: 97 SSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSS-PSSSSSSSSSSPSSSSSSPS 155
Query: 609 PCEGTS 626
+S
Sbjct: 156 SSSSSS 161
>AK075319-1|BAC11545.1| 605|Homo sapiens protein ( Homo sapiens
cDNA FLJ90838 fis, clone Y79AA1002129. ).
Length = 605
Score = 29.9 bits (64), Expect = 9.4
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +3
Query: 315 PGDKNCSLPGQRIHQSARVHSQAVPGHETRTRTGQSARRQ-SGAC*SIRTRASSS*KGRA 491
P L GQ ++ + A GHE T AR +G C + T A S A
Sbjct: 95 PAAAEAPLRGQYKVTASPETAVAGVGHELGTAGDAGARPDLAGTCQAELTAAGSEEPSSA 154
Query: 492 GTRQSACTAPVPSRKKSTLPS*GSSEGSRAVP 587
G S+C+ P P + +L S S + P
Sbjct: 155 GGLSSSCSDPSPPGESPSLDSLESFSNLHSFP 186
>AB075509-1|BAE45756.1| 298|Homo sapiens putative protein product
of Nbla00402 protein.
Length = 298
Score = 29.9 bits (64), Expect = 9.4
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +3
Query: 315 PGDKNCSLPGQRIHQSARVHSQAVPGHETRTRTGQSARRQ-SGAC*SIRTRASSS*KGRA 491
P L GQ ++ + A GHE T AR +G C + T A S A
Sbjct: 95 PAAAEAPLRGQYKVTASPETAVAGVGHELGTAGDAGARPDLAGTCQAELTAAGSEEPSSA 154
Query: 492 GTRQSACTAPVPSRKKSTLPS*GSSEGSRAVP 587
G S+C+ P P + +L S S + P
Sbjct: 155 GGLSSSCSDPSPPGESPSLDSLESFSNLHSFP 186
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.138 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,614,002
Number of Sequences: 237096
Number of extensions: 1888105
Number of successful extensions: 5208
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5174
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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