Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0177
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.83 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 65  CTLEMFFHVIVFASIYY 115
           CT+ + FH+I+FA + Y
Sbjct: 42  CTIVIIFHLILFAVLLY 58


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 579 TIHWLQLNYVRDFLISFFIFTFLVTFNSTI*YILK*RIFFYQIV 448
           T+H L L  +  F  +F IFT  + F   +  +L    F+Y  +
Sbjct: 203 TLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFI 246



 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = -3

Query: 606 IKYFYLQ--TRTIHWLQLNYVRDFLISFFIFTFLVTF 502
           I YFY      T+H L L  +  F  +F IFT  + F
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLF 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,984
Number of Sequences: 336
Number of extensions: 2799
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)