Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0176
(743 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 453 e-126
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 108 1e-22
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 108 2e-22
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 102 8e-21
UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-direct... 97 3e-19
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 83 9e-15
UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Re... 81 2e-14
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 80 5e-14
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 80 7e-14
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 72 2e-11
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 64 3e-09
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 61 3e-08
UniRef50_Q86GH0 Cluster: Pol protein; n=1; Drosophila americana|... 61 3e-08
UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Re... 60 6e-08
UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila melanogast... 57 4e-07
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 50 6e-05
UniRef50_Q9Y026 Cluster: NL1Tc; n=2; Trypanosoma cruzi|Rep: NL1T... 45 0.002
UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster subgro... 44 0.004
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 43 0.009
UniRef50_Q9C4A8 Cluster: Pol-like protein Pol-1; n=3; Tricholoma... 43 0.009
UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2... 42 0.021
UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1... 41 0.028
UniRef50_A7TCP1 Cluster: Predicted protein; n=4; Nematostella ve... 40 0.065
UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse tr... 40 0.085
UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Re... 40 0.085
UniRef50_Q4EC82 Cluster: Pol protein; n=2; Wolbachia endosymbion... 39 0.11
UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles g... 39 0.11
UniRef50_Q5ZP67 Cluster: Soluble protein; n=1; Cotesia congregat... 39 0.15
UniRef50_UPI0000585167 Cluster: PREDICTED: similar to endonuclea... 38 0.26
UniRef50_UPI0000E487CB Cluster: PREDICTED: similar to endonuclea... 38 0.34
UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles g... 38 0.34
UniRef50_Q6IFU2 Cluster: Pol polyprotein; n=6; Schistosoma|Rep: ... 38 0.34
UniRef50_Q9TYX8 Cluster: Putative uncharacterized protein R11E3.... 37 0.46
UniRef50_UPI0000E4721F Cluster: PREDICTED: similar to endonuclea... 36 0.80
UniRef50_UPI0000D57951 Cluster: PREDICTED: similar to RNA-direct... 36 0.80
UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like p... 36 1.1
UniRef50_UPI0000E47200 Cluster: PREDICTED: similar to endonuclea... 36 1.1
UniRef50_UPI0000E47148 Cluster: PREDICTED: similar to endonuclea... 36 1.1
UniRef50_A7T3Q8 Cluster: Predicted protein; n=3; Nematostella ve... 36 1.1
UniRef50_Q5B7Y7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A3TKA7 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_A7T2B1 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.8
UniRef50_A6R5U3 Cluster: Predicted protein; n=10; Ajellomyces ca... 35 2.4
UniRef50_A7DJG3 Cluster: Endonuclease/exonuclease/phosphatase; n... 34 4.2
UniRef50_A1R6N4 Cluster: Putative glycosyl transferase, group 1 ... 34 4.2
UniRef50_A6RFJ6 Cluster: Predicted protein; n=6; Ajellomyces cap... 34 4.2
UniRef50_A6R9N6 Cluster: Predicted protein; n=24; Ajellomyces ca... 34 4.2
UniRef50_UPI0000E476C1 Cluster: PREDICTED: similar to endonuclea... 33 5.6
UniRef50_UPI0000D56FCD Cluster: PREDICTED: similar to CG12090-PC... 33 5.6
UniRef50_A7RPV2 Cluster: Predicted protein; n=4; Nematostella ve... 33 5.6
UniRef50_A7Q5T8 Cluster: Chromosome chr14 scaffold_54, whole gen... 33 7.4
UniRef50_Q8YTD0 Cluster: All2792 protein; n=1; Nostoc sp. PCC 71... 33 9.8
UniRef50_Q3W3J9 Cluster: Regulatory protein, MarR; n=2; Frankia ... 33 9.8
UniRef50_Q1ZBI5 Cluster: Putative uncharacterized protein; n=1; ... 33 9.8
UniRef50_A4B3A9 Cluster: Putative uncharacterized protein; n=1; ... 33 9.8
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 33 9.8
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
transcriptase-like protein; n=9; cellular organisms|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 960
Score = 453 bits (1117), Expect = e-126
Identities = 219/247 (88%), Positives = 225/247 (91%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKI 181
RNDR TARGGGTVIYYRRALHC+PLD PAL NIEASVCRISLTGHAPIVIASVYLPP+KI
Sbjct: 64 RNDRRTARGGGTVIYYRRALHCIPLDPPALVNIEASVCRISLTGHAPIVIASVYLPPEKI 123
Query: 182 VLSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTH 361
VLSSDIEALL MGSSVILAGDLNCKH+RWN+HTTTPNGRRLDALVDDLAFDI+APLTPTH
Sbjct: 124 VLSSDIEALLSMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIIAPLTPTH 183
Query: 362 YPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDW 541
YPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGR+PDSVPVTRTVVDW
Sbjct: 184 YPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRSPDSVPVTRTVVDW 243
Query: 542 HTLGISLAEXXXXXXXXXXXXXXXXQDTAEAIDILT*HITSTLDRSSKQVVAEDFLHRFK 721
HTLGISLAE QDTAEAIDILT HITSTLDRSSKQVVAEDFLHRFK
Sbjct: 244 HTLGISLAESDPPSLPFSPDSTPSPQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFK 303
Query: 722 LPDDIRE 742
LPDDI E
Sbjct: 304 LPDDIGE 310
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 108 bits (260), Expect = 1e-22
Identities = 65/178 (36%), Positives = 87/178 (48%)
Frame = +2
Query: 8 DRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVL 187
DR A GGG I RR + ++ + EA I T PI + + Y PP+
Sbjct: 401 DRPDAAGGGVAILIRRNIRHRAINTD-FPDCEAVGVEIH-TKSTPIRVIAFYAPPNPKEK 458
Query: 188 SSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYP 367
S + +L ILAGDLN KH W P G+ L + I PL PTH+P
Sbjct: 459 FSSLHSLFNTNIPTILAGDLNAKHTSWGCIHNNPAGQSLLKKIMKHNICIEPPLVPTHFP 518
Query: 368 LNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDW 541
H PDILDI L KN+TL +L SDH PV++K+ +PD +P+T + +DW
Sbjct: 519 GCATHDPDILDIFLTKNITLP-SDPWTTEDLSSDHNPVLVKIPSSPDFLPITTSSIDW 575
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 108 bits (259), Expect = 2e-22
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 2/182 (1%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKI 181
R DR GGGT I+ + L P L N+EA ++ T + P+ + + Y P
Sbjct: 540 RADRGIGPGGGTAIFVSNRIKHSVLATPDLRNMEAVGINVA-TANGPLRLFACYNRPQIP 598
Query: 182 VLSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVD-DLAFDIVAPLTPT 358
+L D++ L + I AGD N KH+ W + + NG L+ D +L ++AP+ PT
Sbjct: 599 ILEEDLQTLFDGNTPTIAAGDFNAKHINWGSRRSNRNGNFLNGFTDQNLDISVMAPVEPT 658
Query: 359 HYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLG-RAPDSVPVTRTVV 535
Y N DILD+A++KNV ++ + +++L SDH PV+M++G A D + T V
Sbjct: 659 FY-RNSDGAADILDVAIVKNVVHQVR-LTAINDLSSDHNPVLMQIGNEANDPIVCRYTSV 716
Query: 536 DW 541
DW
Sbjct: 717 DW 718
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 102 bits (245), Expect = 8e-21
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKI 181
R DR GGGT I+ + L P L N+EA ++ T + P+ + + Y P
Sbjct: 183 RADRGIGPGGGTAIFVSNRIKHSVLATPDLRNMEAVGINVA-TANGPLRLFACYNRPQIP 241
Query: 182 VLSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDD-LAFDIVAPLTPT 358
+L D++ L + I AGD N KH+ W + + NG L+ D L ++AP+ PT
Sbjct: 242 ILEEDLQTLFDGNTPTIAAGDFNAKHINWGSRRSNRNGNILNGFTDQHLDISVMAPVEPT 301
Query: 359 HYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVD 538
Y N DILD+A++KNV ++ + +++L SDH PV+M++G + T+ +V+
Sbjct: 302 FY-RNSDGTADILDVAIVKNVVHQVR-LTAINDLSSDHNPVLMQIGNEANDPIFTKHLVN 359
>UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 894
Score = 97.5 bits (232), Expect = 3e-19
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 1/177 (0%)
Frame = +2
Query: 8 DRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVL 187
DRL R G V R H V L AP L N EA ++ T + P+ + + Y P +L
Sbjct: 358 DRLRRRNGNFVS--NRVKHSV-LAAPDLRNREAVSINVA-TANGPLRLFACYNRPQIPIL 413
Query: 188 SSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDD-LAFDIVAPLTPTHY 364
D++ L + I AGD N KH+ W + + NG L+ D L ++AP+ PT Y
Sbjct: 414 EEDLQTLFDGNTLTIAAGDFNAKHINWESRRSNRNGNILNGFTDQHLDISVLAPVEPTFY 473
Query: 365 PLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVV 535
N DILD+A++KNV ++ + +++L SDH PV+M++G + P+ R +
Sbjct: 474 -RNSDGAADILDVAIVKNVVHQVR-LSAINDLSSDHNPVLMQIGNEAND-PIIRDAI 527
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 82.6 bits (195), Expect = 9e-15
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 2/238 (0%)
Frame = +2
Query: 29 GGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEAL 208
GG I + +L PL A + ++ + I T PI +VY PP + + + +
Sbjct: 66 GGAAILIKNSLAHFPLTPIATAKVQLAPAVIE-TALGPISFGAVYCPPRFAWTTDEFKDI 124
Query: 209 LG-MGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHR 385
L + I+AGD N H W + G L LV + D +A PT YP
Sbjct: 125 LEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGS 184
Query: 386 PDILDIALLKNVTLRLHS-IEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHTLGISL 562
P +D AL K V L +H+ I V EL SDH P+V+ L S P ++ T + +
Sbjct: 185 PGYIDFALTKGV-LGIHANISAVVELSSDHLPLVITLDAGAISYPKMERLITRRT-NLEV 242
Query: 563 AEXXXXXXXXXXXXXXXXQDTAEAIDILT*HITSTLDRSSKQVVAEDFLHRFKLPDDI 736
+ QD +AI++LT +I S +++ + + R +P +I
Sbjct: 243 FQSQLESTLPLNTAINSGQDVDDAIELLTNNIKSAARLATRSISRQPAADRIPIPREI 300
>UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Rep:
Pol protein - Drosophila virilis (Fruit fly)
Length = 891
Score = 81.4 bits (192), Expect = 2e-14
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Frame = +2
Query: 29 GGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEAL 208
GG I + L +L ++ ++ R+ T IAS Y PP+ VL+ D L
Sbjct: 66 GGAAILISNHIEYQALPGISLPQLQCAIVRLR-TDLGGANIASCYWPPNHAVLADDYVCL 124
Query: 209 LG-MGSSVILAGDLNCKHVRWNTHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNIAH 382
+G + ++ GD N KH W P G L + L+D ++++ PTH+P N ++
Sbjct: 125 FNQLGENFLIGGDWNAKHRLWGNMRRCPRGSILANILMDSNKYNVLTTAEPTHFPSN-SN 183
Query: 383 RPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 493
RP +LD + ++ +I V+EL SDH P++++L
Sbjct: 184 RPSVLDFGIYAGISSHRLAISRVTELHSDHLPLLVQL 220
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 80.2 bits (189), Expect = 5e-14
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Frame = +2
Query: 29 GGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD--IE 202
GGT I R + L+ + ++++ + L + +A+VY PP + +S D +E
Sbjct: 65 GGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-NGSTTLAAVYCPP-RFPISEDQFME 122
Query: 203 ALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRL-DALVD-DLAFDIVAPLTPTHYPLNI 376
+G I AGD N KH W + TP G++L +AL + D V+P PT++P +
Sbjct: 123 FFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPADP 182
Query: 377 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 493
PD++D A+ K+V + + E +++L SDH PV + +
Sbjct: 183 RKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNM 221
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 79.8 bits (188), Expect = 7e-14
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Frame = +2
Query: 20 ARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISL-TGHAPIVIASVYLPPDKIVLSSD 196
+RGG VI R H PL P +N + + R+ L T + +A+VYLPP + + D
Sbjct: 65 SRGGSAVIIKSRLCHS-PL-TPISTN-DRQIARVHLQTSVGTVTVAAVYLPPAERWIVDD 121
Query: 197 IEALLG-MGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLN 373
+++ +G+ I GD N KH W + P G+ L ++ + ++A PT Y N
Sbjct: 122 FKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYN 181
Query: 374 IAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP 517
P LD + + ++ + EL SDH P++ L P P
Sbjct: 182 PLLTPSALDFFITCGYGMGRLDVQTLQELSSDHLPILAVLHATPLKKP 229
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 71.7 bits (168), Expect = 2e-11
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Frame = +2
Query: 29 GGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPD-KIVLSSDIEA 205
GG ++ R L P +I+ S +++ TG + +++Y P +I +
Sbjct: 67 GGVAVFVRTTLRHFPQRVIETRHIQLSSVKVA-TGLGDLQFSAIYCSPSTRIEERHFTDI 125
Query: 206 LLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHR 385
+ G ++ GD N +H W +P GR L + I+A +PT YP +H
Sbjct: 126 IRACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHT 185
Query: 386 PDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHT 547
P +D A+ + L +I +LDSDH P+++ + V + +V HT
Sbjct: 186 PSCIDFAVYHGIPDHLATITQSWDLDSDHLPLIISIETDSTHVNPSPRLVTKHT 239
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster
subgroup|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1103
Score = 64.1 bits (149), Expect = 3e-09
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Frame = +2
Query: 74 LDAPALSNIEASVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDL 247
+ + ++ I +S R +T API VY L + E LL S IL GD
Sbjct: 99 MQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDW 158
Query: 248 NCKHVRWNTHTTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVT 424
NCKH W + + GR L +++ DIVA TH+P + +P LD A+ K
Sbjct: 159 NCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFH 218
Query: 425 LRLHSIEVVSELDSDHRPVVMKL 493
+ EL SDH P+ + L
Sbjct: 219 TQKLKTYSTDELSSDHLPIQIVL 241
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:
ORF1 - Drosophila melanogaster (Fruit fly)
Length = 884
Score = 60.9 bits (141), Expect = 3e-08
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 18/181 (9%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLP---- 169
RNDR +RGGG I L + IE +I+ ++ + I S+Y
Sbjct: 63 RNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSIYFAGNTS 122
Query: 170 ---PDKIVLS-----------SDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLD 307
P LS SD+ + + + ++ GD N +H W G+ L+
Sbjct: 123 KCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILN 182
Query: 308 ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVM 487
L D F I+ P PT+ P N + LD+ L N+ +L + V+ EL SDH PVV+
Sbjct: 183 ELSDLGKFSILYPTQPTYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVI 241
Query: 488 K 490
K
Sbjct: 242 K 242
>UniRef50_Q86GH0 Cluster: Pol protein; n=1; Drosophila
americana|Rep: Pol protein - Drosophila americana (Fruit
fly)
Length = 1517
Score = 60.9 bits (141), Expect = 3e-08
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 6/163 (3%)
Frame = +2
Query: 23 RGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIE 202
R GG I R + + L+ + + I+L+ I++A +Y PP S +
Sbjct: 136 RFGGVAILIRHGIKHIALEPIMQDACQCAPVAITLSTQETILVAPIYCPPQYKWTSENFG 195
Query: 203 ALLGMGSSV-----ILAGDLNCKHVRWNTHTTTPNGRRLDALV-DDLAFDIVAPLTPTHY 364
LL S+ I+ GD N K W GR L + + ++I+A THY
Sbjct: 196 KLLSHIDSLSPQGFIICGDWNAKSTWWGNMRHCQRGRELLRTIHSNKKYNILATGGTTHY 255
Query: 365 PLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 493
P ++P +D A+ + R +++L+SDH P+++ L
Sbjct: 256 PYARGNQPSAIDFAIYGGIGDRRLRTYSINDLNSDHLPILIDL 298
>UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1092
Score = 60.1 bits (139), Expect = 6e-08
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +2
Query: 143 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRR 301
IVIASVY PP +D+ E +G + +IL GD N KH +W G
Sbjct: 125 IVIASVYCPPSLSWSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAA 184
Query: 302 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 478
L DA+ D +IVA + TH+P + P +D ++ K + I + L SDH P
Sbjct: 185 LYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSICKRLGRYEKRISSSAHLSSDHLP 244
Query: 479 VVMKL 493
+++++
Sbjct: 245 ILLEI 249
>UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila
melanogaster|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1227
Score = 57.2 bits (132), Expect = 4e-07
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Frame = +2
Query: 95 NIEASV-CR-ISLTGHAPIVIASVYLPPDKIVLSSDI-EALLGMGSSVILAGDLNCKHVR 265
NI +S+ C + L I I + Y+PP +I SSDI E L + S IL GDLN
Sbjct: 83 NINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISEILQNLNGSTILLGDLNSWSPL 142
Query: 266 WNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIE 445
W + T G++++ ++ + + ++ +PTH L+ + +DI+L+ + S
Sbjct: 143 WGSPRTNTRGKKIETVILENSLIVLNDGSPTH--LSTHNTFTHIDISLISPQIAHMCSWS 200
Query: 446 VVSEL-DSDHRPVVMKLG---RAPDSVPVTRTVVD 538
+ L SDH P+ + + R +++P+ + D
Sbjct: 201 ISDNLHGSDHFPITIHINTPTRPDNTLPLPKYKTD 235
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein;
n=80; Culicimorpha|Rep: Reverse transcriptase homolog
protein - Chironomus thummi
Length = 883
Score = 50.0 bits (114), Expect = 6e-05
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDK- 178
R DR+ GG I +R L + +E ++ + I SVYLP
Sbjct: 60 RLDRVDRPKGGVAIIVKRNLKHQLQPSYNTKLMECIGIKVFINDTDSCHILSVYLPRGSK 119
Query: 179 -----IVLSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVA 343
+ L DI + + + + GD N KH WN + +G L + + F I
Sbjct: 120 GGEIDLHLRDDINKITNLRGNYYICGDFNAKHREWNCNVANKSGNILQEMSGE--FVIYF 177
Query: 344 PLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEV-VSELDSDHRPVVMKL 493
P +PT+YP + +D+ +L N L + E+ +E SDH V ++
Sbjct: 178 PDSPTYYPEDRNKSVSTIDL-MLSNSNSNLETTELQCTEAMSDHCAVYFQI 227
>UniRef50_Q9Y026 Cluster: NL1Tc; n=2; Trypanosoma cruzi|Rep: NL1Tc -
Trypanosoma cruzi
Length = 327
Score = 45.2 bits (102), Expect = 0.002
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Frame = +2
Query: 23 RGGGTVIYYRRALHC--VPLDAPAL-SNIEASVCRISLTGHAPIVIASVYL-PPDKIVLS 190
+GGG + R+ L +PL P +++E V +++L + +++AS Y+ PP ++ S
Sbjct: 109 KGGGVAVLVRKNLRSKRIPLTIPQHDTSLEVVVVQVALDQNRDLIVASAYMRPPPQVTQS 168
Query: 191 -SDIEALLGMGSSVILAGDLNCKHVRWNTH-TTTPNGRRLDALVDDLAFDIVAPLTPTHY 364
+ L S ++L GD N H +W T+P+ + L +L D L T
Sbjct: 169 FRRLVNCLPASSPLLLCGDFNMHHPQWEPFLETSPSEVAAEFL--ELCTDAGLTLVNTPG 226
Query: 365 PLNIA---HRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRA-PDSVP 517
+ A +D+ K++T+ S VS L SDH + L +A D++P
Sbjct: 227 EITYARGTRERSCIDLTWSKHLTVSDWSAS-VSPL-SDHYVLTFTLHQAFKDTIP 279
>UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster
subgroup|Rep: Putative ORF2 - Drosophila melanogaster
(Fruit fly)
Length = 1219
Score = 44.0 bits (99), Expect = 0.004
Identities = 32/161 (19%), Positives = 70/161 (43%), Gaps = 2/161 (1%)
Frame = +2
Query: 17 TARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD 196
T R GG + +++ L+ I+ I++ + I S Y+ P K + +
Sbjct: 59 TNRFGGVRLLVHKSIQHTVLNI----TIDIEAIAINIESKLKLNIFSTYISPTKNITNQT 114
Query: 197 IEALLGMGSSV-ILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLN 373
+ + + ++ GD N H W + TT G+ +D++ ++ +PTH+ +
Sbjct: 115 LHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFSTH 174
Query: 374 IAHRPDILDIALLKNVTLRLHSIEVVSEL-DSDHRPVVMKL 493
+ +D+ L + +++++L SDH P++ L
Sbjct: 175 NTYTH--IDLTLCSPILAPHAKWKILNDLHGSDHFPIITTL 213
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 92 SNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLG-MGSSVILAGDLNCKHVRW 268
+ ++A RI+L H I S+YLPP + +D+E LL + ++ GD N + W
Sbjct: 82 TTLQAVAARITL--HKVITCCSLYLPPGAPLNRTDMEDLLKQLPRPYLILGDFNAHNTMW 139
Query: 269 NTHTTTPNGRRLDALVDDLAFDIVAPLTPTH 361
++ T GR L+ + I+ +PT+
Sbjct: 140 GSNNTDTRGRMLEDIFLQHDLCILNDASPTY 170
>UniRef50_Q9C4A8 Cluster: Pol-like protein Pol-1; n=3; Tricholoma
matsutake|Rep: Pol-like protein Pol-1 - Tricholoma
matsutake (Matsutake mushroom) (Tricholoma nauseosum)
Length = 445
Score = 42.7 bits (96), Expect = 0.009
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Frame = +2
Query: 131 GHAPIVIASVYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDA 310
G I++A+VY ++ E+++ + + GD N +H W+ + D
Sbjct: 120 GEDVILLANVYSDSQHSAITLLFESVMTIPRLHFMCGDFNVRHASWDPQ-GPEHSIHADH 178
Query: 311 LVDD---LAFDIVAPLT--PTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSEL--DSD 469
LV+ L P+ PTH+P P ++D+ + + E+V E SD
Sbjct: 179 LVETATALGLTRALPVVEGPTHFPPQQGLHPTVIDLMFVPTDLRFVLYCEIVPEARGTSD 238
Query: 470 HRPVVMKLGRAPDSVPVTR 526
H P+ + L VPVT+
Sbjct: 239 HAPLTLVLPGPGSLVPVTK 257
>UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2;
Schistosoma|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 831
Score = 41.5 bits (93), Expect = 0.021
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHA-PIVIASVYLPPD- 175
R+DRL RGGG +IY +L+ + D P L+ ++ SV + ++ ++ +Y P+
Sbjct: 53 RSDRLKGRGGGCLIYAHSSLNSLLCDMPELNKLKDSVWIVLKPSNSITLLFGCIYQQPNL 112
Query: 176 ---KIVLSSDIEALLGM--GSSVILAGDLNCKHVRW 268
KI + S++ L + ++ GD N + W
Sbjct: 113 AIGKIAVLSEVFTLASSLPFTGKLICGDFNMPEISW 148
>UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1;
Schistosoma mansoni|Rep: Endonuclease-reverse
transcriptase - Schistosoma mansoni (Blood fluke)
Length = 1067
Score = 41.1 bits (92), Expect = 0.028
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPP--- 172
R DR+T +GGG +IY + + LS + S T I+I +Y P
Sbjct: 181 RCDRVTKKGGGCLIYASKNMRAEIFSDHTLSKVPDSTWLTVHTLECKILIGCIYRAPNTP 240
Query: 173 ---DKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTP 289
D I+ S +A + ++ GD N + W TH+ P
Sbjct: 241 SLTDTIISESFAKAASLDFACKVVCGDFNLPTINWKTHSGPP 282
>UniRef50_A7TCP1 Cluster: Predicted protein; n=4; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 412
Score = 39.9 bits (89), Expect = 0.065
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKI 181
R DR GGG +Y R +++CV ++EA I P +++ VY P I
Sbjct: 248 RKDR-NRDGGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFIVSVVYRPESPI 306
Query: 182 VLSSDIEALL----GMGSSVILAGDLNC 253
+ E L+ ++ GDLNC
Sbjct: 307 EYFNRFEELIKAVDDEDKEHVILGDLNC 334
>UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse
transcriptase homolog, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to reverse
transcriptase homolog, partial - Nasonia vitripennis
Length = 1316
Score = 39.5 bits (88), Expect = 0.085
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Frame = +2
Query: 23 RGGGTVIYYRRALHCVPL---DAPALSNIEASVCRISLTGHAPIVIASVYLPP------- 172
+GGGT I R+ + + + P +N+E++ +I T + ++I SVY
Sbjct: 348 QGGGTGILIRKYIDYKVVHFTNTPHHNNLESTAIKIQCTDNTQLMIISVYAAGHNQHGFI 407
Query: 173 DKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLT 352
D++ + + +LAGD+N + W T G L ++ + D+ +
Sbjct: 408 DELNHLFTQNNIQTNNTYFLLAGDINARVRHWGDSITKSRGGYLTNWLNSNSIDLRLNIY 467
Query: 353 PTHYPLNIAHRPDILDIALLK---NVTLRLHSIEVVSELDSDHRPVVM 487
P P N LD+ + N+ ++ V + DSDHR + M
Sbjct: 468 PPAEP-NFPSSNSYLDVCIADARINIVNSANTKCQVLDYDSDHRAIYM 514
>UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Rep:
Pol-like protein - Aedes aegypti (Yellowfever mosquito)
Length = 1208
Score = 39.5 bits (88), Expect = 0.085
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Frame = +2
Query: 41 IYYRRALHCVPLD--APALSNIEASVCRISLTGHAPIVIASVYLPPDKI--VLSSDIEAL 208
IY+ A+ +P +P N + + + L P+ + S YLP I + AL
Sbjct: 67 IYHSAAIGVLPTVPFSPLPLNTDLPIVAVKLEYPFPMTVISGYLPNGNIPDLKLRLFNAL 126
Query: 209 LGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLA--FDIVAPLTPTHYPLNIAH 382
+ S +++ D+N H W + +PN R +L+ D+A D+V L
Sbjct: 127 QSLSSPILVMWDVNGHHPEWG--SVSPNDR--GSLIMDVAEKLDLVI-LNDGATTFTRGQ 181
Query: 383 RPDILDIALLK-NVTLRLHSIEVVSELDSDHRPVVMKLGRAPDS 511
R +D++L ++ RL + SDH P+ + + P +
Sbjct: 182 RNSAIDVSLCSPSIVNRLLWTAKEDPMGSDHHPIFIHIDEQPQA 225
>UniRef50_Q4EC82 Cluster: Pol protein; n=2; Wolbachia endosymbiont
of Drosophila ananassae|Rep: Pol protein - Wolbachia
endosymbiont of Drosophila ananassae
Length = 463
Score = 39.1 bits (87), Expect = 0.11
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 266 WNTHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSI 442
W + G+ L +A+ ++I+A T YP N P +D A+ SI
Sbjct: 2 WGNARSCNRGKLLAEAVQAKNRYNILATGEATCYPFNKKANPSAIDFAVYSGFLPTHISI 61
Query: 443 EVVSELDSDHRPVVMK--LGRAP 505
VSEL SDH P+++ LG+ P
Sbjct: 62 SSVSELSSDHVPLIINAALGKTP 84
>UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1201
Score = 39.1 bits (87), Expect = 0.11
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 8/135 (5%)
Frame = +2
Query: 137 APIVIASVYLPPDKIVLSSDIEALLGM-------GSSVILAGDLNCKHVRWNTHTTTPNG 295
A I SVY PP + + + E LLG S V++AGD N H W + G
Sbjct: 146 AGITFISVYAPPS--LSAHEFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSGRNGQRG 203
Query: 296 RRLDALVDDLAFDIV-APLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDH 472
L V+ L I+ PT A ++D++ +R + V+ SDH
Sbjct: 204 IELLQTVETLGLSILNQGRKPTFIGRGFA-ASSVIDVSFASREIVRPDTWSVIPFSRSDH 262
Query: 473 RPVVMKLGRAPDSVP 517
+ ++ + PD P
Sbjct: 263 ELIAFEV-KQPDENP 276
>UniRef50_Q5ZP67 Cluster: Soluble protein; n=1; Cotesia congregata
bracovirus|Rep: Soluble protein - Cotesia congregata
bracovirus
Length = 427
Score = 38.7 bits (86), Expect = 0.15
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHC-VPLDAPALSNIEASVCRISLTGHA--PIVIASVYLPP 172
RNDR GGG ++ + L V + LS+ E + L + I++ +Y PP
Sbjct: 338 RNDRRLRHGGGVALFVKNTLSSRVVACSSNLSDFELEYIAVELVAESSRKILVCVIYRPP 397
Query: 173 DKIVLSS---DIEALLGMGSSVILAGDLNC 253
+ + D + LL +++++ GDL C
Sbjct: 398 RAALFDAFEQDFDRLLPFYNNIVIIGDLAC 427
>UniRef50_UPI0000585167 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 737
Score = 37.9 bits (84), Expect = 0.26
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 11/179 (6%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKI 181
R DR A GGG + ++ + V L+ E + G + I S Y PP+
Sbjct: 147 RKDR-NANGGGVFLAFKNDIAVVEKPEINLALAEIIWASVQFKGGTTLYIGSYYRPPNAS 205
Query: 182 --VLSSDIEALLGMGS-------SVILAGDLNCKHVRWN-THTTTPNGRRL-DALVDDLA 328
L +++ G+ S +VIL GD N + WN T T++P + L ++ ++ L
Sbjct: 206 NDALDQLHDSINGIFSKHTKRVPNVILGGDFNLPDIDWNSTTTSSPRTQSLHNSFIELLN 265
Query: 329 FDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAP 505
+ LT + ++LD+ L N L + ++ S + SDH +V + P
Sbjct: 266 Y---FNLTQVVKHITRPTSGNVLDLTLTSNDEL-IGDVQTASGI-SDHSILVYSISLPP 319
>UniRef50_UPI0000E487CB Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1060
Score = 37.5 bits (83), Expect = 0.34
Identities = 50/194 (25%), Positives = 77/194 (39%), Gaps = 13/194 (6%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPAL-SNIEASVCRISLTGHAPIVIASVYLPPDK 178
R DR GGG I L + + P S+ E C + L P+ I S Y PP+
Sbjct: 214 RKDR-NIHGGGVFIAIIDTL--IVTECPEFDSDCEIQWCNVQLANAKPLYIGSYYCPPNN 270
Query: 179 IV---------LSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRL--DALVDDL 325
LS + ++++AGD N + W+ +TT L+D L
Sbjct: 271 RQQGLEGLHQSLSKIMTRHRRSHPNILIAGDFNHPDINWDDQSTTNPATSTCHQKLLDIL 330
Query: 326 AFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAP 505
+ L+ T + +ILD+ + N L + ++ V S + SDH V L P
Sbjct: 331 LHN---SLSQTVREVTRPSSNNILDLVVTSNPAL-VENVCVKSGI-SDHNIVTFTLAANP 385
Query: 506 D-SVPVTRTVVDWH 544
SV R + +H
Sbjct: 386 KISVKPLRKIYQFH 399
>UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1248
Score = 37.5 bits (83), Expect = 0.34
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +2
Query: 197 IEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNI 376
I+ L+ V+LAGD N H W + T P G L LV+ L +++ T +
Sbjct: 106 IDILIRGHPRVLLAGDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTFRGCG 165
Query: 377 AHRPDILDIA 406
+ RP +D+A
Sbjct: 166 SARPSRIDVA 175
>UniRef50_Q6IFU2 Cluster: Pol polyprotein; n=6; Schistosoma|Rep: Pol
polyprotein - Schistosoma mansoni (Blood fluke)
Length = 1227
Score = 37.5 bits (83), Expect = 0.34
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASV-CRISLTGHAPIVIASVYLPPDK 178
R DR T RGGG +I+ L ++ L+++ S+ I+ H+ +++ +Y PD
Sbjct: 336 RCDRETKRGGGCLIFALDTLTTNKVEDSILNSLPESIWISINTLNHS-LLLGCIYRAPDS 394
Query: 179 I------VLSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIV 340
++++ I A S+ I+ GD N + W+T + + ++++ +
Sbjct: 395 TDNLNDRIINAFIHASTLNFSARIITGDFNYPEINWSTGSCQSSNDEFLSILNLYCWSQW 454
Query: 341 APLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELD-SDHRPVVMKLGRAPD-SV 514
TPT + LD+ ++ T+ L S++V +E + SDHR V L P +
Sbjct: 455 V-RTPT-------RGDNTLDLIFGRD-TIPL-SVQVYNEFESSDHRMVACALPIYPSYNR 504
Query: 515 PVTRT 529
P+ RT
Sbjct: 505 PIQRT 509
>UniRef50_Q9TYX8 Cluster: Putative uncharacterized protein R11E3.3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein R11E3.3 - Caenorhabditis elegans
Length = 931
Score = 37.1 bits (82), Expect = 0.46
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Frame = +2
Query: 149 IASVYLPP-----DKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNTH-TTTPNGRRLDA 310
I++VY+PP + L +D + S I++GD+N H W++ + GR L
Sbjct: 3 ISNVYVPPRSSSSNHARLMTDFSNIFQTKSKSIISGDVNAHHSAWHSEGSEDTRGRELAE 62
Query: 311 LVDDLAFDIVAPLTPTHYPLNI--AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVV 484
L+ DL D++ H + PDI ++ + H + +L SDH P+
Sbjct: 63 LI-DLHPDLIIQNEQVHTRADTYSISSPDI--TICTADLATKCH-WSTLYKLGSDHIPMK 118
Query: 485 MKLGRA 502
+K+ +A
Sbjct: 119 LKINQA 124
>UniRef50_UPI0000E4721F Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 647
Score = 36.3 bits (80), Expect = 0.80
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 7/171 (4%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPP-DK 178
R DR GG ++ ++ L + + + E ++ L G ++I + Y P D
Sbjct: 51 RKDRQVGIHGGILVACKKDLILTRKEEFEVES-ELLWSQLELKGRHSLLIGTAYKPRHDD 109
Query: 179 IVLSSDIEALLGM------GSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIV 340
S++E LG G +++LAGD N ++ W T N + L V
Sbjct: 110 KNFVSELENSLGKISRKGRGYNILLAGDFNQPNIDWVNSTVVSNHSASKDTAESL-LQTV 168
Query: 341 APLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 493
+ Y R +ILD+ N +L + I V + SDH V+ L
Sbjct: 169 TGFGLSQYVRQPTRRDNILDLVFTNNDSL-VRDIRVKHGI-SDHYIVITDL 217
>UniRef50_UPI0000D57951 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=2; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 971
Score = 36.3 bits (80), Expect = 0.80
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Frame = +2
Query: 143 IVIASVYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDD 322
I+ Y + LS+++ I+ GD N +H + T NG L + +
Sbjct: 105 IITFFTYYNSPRQCLSNELMQYAASLPKAIILGDFNARHTDFGDTLTNRNGHILIDAISN 164
Query: 323 LAFDIVAPLTPTHYPLNIAHRPDILD-IALLKNVTLRL-HSIEVVSELDSDHRPVVMKLG 496
L + +PTH +N I+D I + +++ R S + + + SDH P+V L
Sbjct: 165 LPLYRIPNSSPTH--INHWEGYSIVDHILVTDSLSNRASDSANIGTTITSDHLPLVFDLS 222
Query: 497 RAPDSVPVTRTVV 535
+ P ++
Sbjct: 223 VSKPRTPTPEYII 235
>UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 1050
Score = 35.9 bits (79), Expect = 1.1
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRIS-LTGHAPIVIASVYLPPDK 178
R DR +RGGG +I+ R L + L ++E + +I+ + H +++ Y PP
Sbjct: 349 RKDRQDSRGGGILIFIRNNLAFIELKNITEKSVELAGLKINNVKPHLELIVC--YRPPGL 406
Query: 179 IVLSS---DIEALLGMGSSVILAGDLNCKHVRWNTHTTTPN 292
S +I + I GD N H WN N
Sbjct: 407 TSSQSIWDEIFNNVDKTKFTIFMGDFNSHHESWNCRKNDSN 447
>UniRef50_UPI0000E47200 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 597
Score = 35.9 bits (79), Expect = 1.1
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Frame = +2
Query: 116 RISLTGHAPIVIASVYLPP-----DKIVLSSDIEALLGMG-SSVILAGDLNCKHVRWNTH 277
R+ L +++A+ Y P D L +I +++ ++IL GD N ++W +
Sbjct: 13 RVKLNNQPDLIVAAFYRSPSSGPSDLHNLHLNINSIMRSRLPNIILTGDFNLPSIQWEEN 72
Query: 278 TTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIAL 409
T + + +L DI+ L T L +ILD+ L
Sbjct: 73 VTIDANPQYGLHIKELMLDIIDQLGLTQMVLQPTRMGNILDLVL 116
>UniRef50_UPI0000E47148 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 810
Score = 35.9 bits (79), Expect = 1.1
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKI 181
R DR GGG I R+ L + D+ ++ E+ +I G P+ + S+Y P D+
Sbjct: 85 RKDR-ERHGGGVFIGLRKDLLGMEEDS-LQTDCESIWVKIFFAGKQPLYVGSMYRPTDRD 142
Query: 182 V-----LSSDIEALLGMGS--SVILAGDLNCKHVRWNTHTTT 286
L ++ L ++ILAGD N + W T++ T
Sbjct: 143 TKPLEELDKALKKLTTKNRLPNIILAGDFNTPDIDWKTNSIT 184
>UniRef50_A7T3Q8 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 371
Score = 35.9 bits (79), Expect = 1.1
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCR-ISLTGHAPIVIASVYLPPDK 178
R DR GG ++Y A+ L S+ E + I + PI+IA VY PD
Sbjct: 169 RKDRTRKERGGVMMYVSHAMAYTRLPTLESSDTELLCTQVIPCKSNCPIIIAGVYRVPDS 228
Query: 179 IV-----LSSDIEALLGMGSSVILAGDLNCKHVRWNTH 277
L IE + +L GD N ++ H
Sbjct: 229 TAEMDAKLEGLIEKMYITNKEALLLGDFNINFLKQQNH 266
>UniRef50_Q5B7Y7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 960
Score = 35.9 bits (79), Expect = 1.1
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Frame = +2
Query: 53 RALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIV-------LSSDIEALL 211
R L V D PA S E + I+ A + I +VY PP+ +V S + LL
Sbjct: 211 RTLTYVQRDLPAHSLPEPILPDITTIYTAGLTIINVYCPPNNLVAPAGAGSTPSILSTLL 270
Query: 212 GMG--SSVILAGDLNCKHVRWNTHTTT----PNGRRLDALVDDLAFDI-VAPLTPTHYP 367
G + ILAGD N +H W T + P L +D ++ + P TPT P
Sbjct: 271 GYAPPENTILAGDFNTQHPFWQPDTESYAVIPGATGLLDWLDAHELELRLEPGTPTRGP 329
>UniRef50_A3TKA7 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 225
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +2
Query: 107 SVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALL---GMGSSVILAGDLN 250
+V R++ G P+ +ASV+L D ++ + +L +G VILAGDLN
Sbjct: 99 AVARVAAPGCEPVAVASVHLSLDAHERAAHAQVILQTINVGGEVILAGDLN 149
>UniRef50_A7T2B1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 445
Score = 35.1 bits (77), Expect = 1.8
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRAL-HCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDK 178
R DR GG +Y R ++ +C+ D ++EA I+ P ++ +Y P
Sbjct: 182 RKDR-NRNVGGVCLYLRSSINYCIRNDL-VPDSVEAVCVEITKPHSRPFFVSIIYRPESP 239
Query: 179 IVLSSDIEALLGMGSSV----ILAGDLNC 253
I +D+E L+ V ++ GDLNC
Sbjct: 240 IDYFNDLEQLIKAVDDVNKEHVMLGDLNC 268
>UniRef50_A6R5U3 Cluster: Predicted protein; n=10; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1390
Score = 34.7 bits (76), Expect = 2.4
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Frame = +2
Query: 146 VIASVYLPPDKIVLSS-------DIEALLGMGSS--VILAGDLNCKHVRWNTHTTTPNGR 298
V+ +VY PP S ++ + GMG+ +++ GDLN H RW N R
Sbjct: 385 VMVNVYAPPPGGYSSEPEESPIGQLQEVAGMGTDAELVILGDLNVHHERWGGVRVERNFR 444
Query: 299 ---RLDALVDDLAFDIVAPLTPTHYP--LNIAHRPDILDIALLKNVTLRLHSIEVVSELD 463
+L A VD L + P+ T + + D+ ++ L + LR +I +
Sbjct: 445 MAWQLIAQVDRLGLQLATPVGATTWQDRGSPGTTIDLTFLSPLLHDKLRRCAIAEEACKG 504
Query: 464 SDHRPVVMKLGRAP 505
SDH+P+ L P
Sbjct: 505 SDHKPIETTLELTP 518
>UniRef50_A7DJG3 Cluster: Endonuclease/exonuclease/phosphatase; n=2;
Methylobacterium extorquens PA1|Rep:
Endonuclease/exonuclease/phosphatase - Methylobacterium
extorquens PA1
Length = 259
Score = 33.9 bits (74), Expect = 4.2
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 329 FDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPD 508
F V P PTH +++ P LD L++ + H V+ SDH P+V+ L AP+
Sbjct: 161 FRDVGPRRPTHAMVDVL--PLRLDRCLVRGLVC--HERMVLPRGLSDHHPIVVHLSPAPE 216
Query: 509 SVP 517
VP
Sbjct: 217 GVP 219
>UniRef50_A1R6N4 Cluster: Putative glycosyl transferase, group 1
family domain protein; n=1; Arthrobacter aurescens
TC1|Rep: Putative glycosyl transferase, group 1 family
domain protein - Arthrobacter aurescens (strain TC1)
Length = 417
Score = 33.9 bits (74), Expect = 4.2
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 50 RRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSV 229
R A+ V D P L + +S ++L H +VI L PD ++ + +LGMGSS
Sbjct: 227 RPAMLLVAGDGPGLREVRSSASAVNLR-HGRVVIRVEGLVPDPRMIYDAADVVLGMGSSA 285
Query: 230 I 232
+
Sbjct: 286 L 286
>UniRef50_A6RFJ6 Cluster: Predicted protein; n=6; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1163
Score = 33.9 bits (74), Expect = 4.2
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Frame = +2
Query: 146 VIASVYLPPDKIVLSS-------DIEALLGMGSS--VILAGDLNCKHVRWNTHTTTPNGR 298
V+ +VY PP S ++ + GMG+ +++ GDLN H RW N R
Sbjct: 385 VMVNVYAPPPGGYSSEPEESPIGQLQEVAGMGTDAELVILGDLNVHHERWGGVRVERNFR 444
Query: 299 ---RLDALVDDLAFDIVAPLTPTHYP--LNIAHRPDILDIALLKNVTLRLHSIEVVSELD 463
+L A VD L + P+ T + + D+ ++ L + LR +I +
Sbjct: 445 MAWQLIAQVDRLGLQLATPVGATTWQDRGSPGTTIDLTFLSPLLHDKLRRCAIAEEACKG 504
Query: 464 SDHRPVVMKLGRAP 505
SDH+P+ L P
Sbjct: 505 SDHKPMETTLELTP 518
>UniRef50_A6R9N6 Cluster: Predicted protein; n=24; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1553
Score = 33.9 bits (74), Expect = 4.2
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Frame = +2
Query: 146 VIASVYLPPDKIVLSS-------DIEALLGMGSS--VILAGDLNCKHVRWNTHTTTPNGR 298
V+ +VY PP S ++ + GMG+ +++ GDLN H RW N R
Sbjct: 686 VMVNVYAPPPGGYSSEPEESPIGQLQEVAGMGTDAELVILGDLNVHHERWGGVRVERNFR 745
Query: 299 ---RLDALVDDLAFDIVAPLTPTHYP--LNIAHRPDILDIALLKNVTLRLHSIEVVSELD 463
+L A VD L + P+ T + + D+ ++ L + LR +I +
Sbjct: 746 MAWQLIAQVDRLGLQLATPVGATTWQDRGSPGTTIDLTFLSPLLHDKLRRCAIAEEACKG 805
Query: 464 SDHRPVVMKLGRAP 505
SDH+P+ L P
Sbjct: 806 SDHKPMETTLELTP 819
>UniRef50_UPI0000E476C1 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 608
Score = 33.5 bits (73), Expect = 5.6
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +2
Query: 221 SSVILAGDLNCKHVRWNTHTTTPNGRR--LDALVDDLAFDIVAPLTPTHYPLNIAHRPDI 394
S +++A D N + W THTT+ +DA+ D V T Y N P++
Sbjct: 134 SHLLIADDFNYASINWETHTTSKESEEAFIDAIEDCFLTQHVK--ESTRYREN--QTPNL 189
Query: 395 LDIALLKNVTLRLHSIEVVSEL-DSDHRPVVMKLGRAPD 508
LD+ LL N + +I+ + L +SDH ++ L PD
Sbjct: 190 LDL-LLTNRDNIISNIDFLPGLGNSDHVCLLFDLLVYPD 227
>UniRef50_UPI0000D56FCD Cluster: PREDICTED: similar to CG12090-PC,
isoform C; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG12090-PC, isoform C - Tribolium castaneum
Length = 1470
Score = 33.5 bits (73), Expect = 5.6
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 36 PSFTIDEPCTASHSTPPRFLTSKHQYVESH*L--DTRRSLSRPFIFHRIRS 182
P T+ E T H PR+ S ++SH L RR LS P + HRI S
Sbjct: 489 PVHTVHETSTIHHKVIPRYKRSSGSLLDSHELIKGQRRKLSDPDVPHRIDS 539
>UniRef50_A7RPV2 Cluster: Predicted protein; n=4; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 546
Score = 33.5 bits (73), Expect = 5.6
Identities = 39/174 (22%), Positives = 71/174 (40%), Gaps = 13/174 (7%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDK- 178
R DR GG V + ++ + + ++E+ C+I + G P+ +Y PPD+
Sbjct: 298 RQDRKCGGGGVLVATKQDSIISSRIHSLEDEHVESVWCKIEIAGTKPLYNGCMYRPPDRQ 357
Query: 179 ----IVLSSDIEALLGMG--SSVILAGDLNCKHVRW------NTHTTTPNGRRLDALVDD 322
L S + + +V++ GD N + W N + N + LV+
Sbjct: 358 PESICSLDSTLNKITSSPCLPNVLVTGDFNLPDISWDCTDCENKYIVKAN-PQYGVLVNQ 416
Query: 323 LAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVV 484
D + + + +ILD+ L N L + EV++ + SDH V+
Sbjct: 417 AFIDTIHEHSLSQGVTEPTRENNILDLVLTTNPDL-ISRTEVLNGM-SDHSIVL 468
>UniRef50_A7Q5T8 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 208
Score = 33.1 bits (72), Expect = 7.4
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 293 GRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLK-NVTLRLHSIEVVSE 457
GR+ L D LA DI + T + PL I +ILD A+L N SIE V+E
Sbjct: 42 GRQSSQLADQLALDIFSWFTHSREPLYIDDLENILDEAMLSLNTMTEDGSIEEVAE 97
>UniRef50_Q8YTD0 Cluster: All2792 protein; n=1; Nostoc sp. PCC
7120|Rep: All2792 protein - Anabaena sp. (strain PCC
7120)
Length = 397
Score = 32.7 bits (71), Expect = 9.8
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 314 VDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 493
+D LA + + P P Y I++ P I LKN+TLR ++D R V K+
Sbjct: 176 IDMLAEENLGPAAPVSYESIISYLPAQSLIPNLKNITLR--------AAEADWRWVAEKI 227
Query: 494 GRAPDS-VPVTRTVVDWHTLGISLAE 568
G D+ +P W LG+ + +
Sbjct: 228 GFNKDAPIPFMEVKYQWGRLGLDILD 253
>UniRef50_Q3W3J9 Cluster: Regulatory protein, MarR; n=2; Frankia sp.
EAN1pec|Rep: Regulatory protein, MarR - Frankia sp.
EAN1pec
Length = 167
Score = 32.7 bits (71), Expect = 9.8
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Frame = +2
Query: 263 RWNTHTTTPNGRR----LDALVDDLAFDIVAPLTPT 358
R N T T GRR LD ++DDL +++APLTPT
Sbjct: 106 RRNVITITAQGRRHLRRLDKVLDDLHEELLAPLTPT 141
>UniRef50_Q1ZBI5 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 161
Score = 32.7 bits (71), Expect = 9.8
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPP--- 172
R DR+T RGGG +I + + P +E +V + + G + IASVY+PP
Sbjct: 42 REDRIT-RGGGVLIGIGKGHTFSRVPTPRQEIME-TVAKQARIGDLHVTIASVYIPPIAN 99
Query: 173 ---DKI-VLSSDIEAL-LGMGSSVILAGDLNCKHVRW 268
+KI D+ L + + +++ GD N V W
Sbjct: 100 NEKEKIEKFKEDLGNLAVVLPGPLLILGDFNSHGVEW 136
>UniRef50_A4B3A9 Cluster: Putative uncharacterized protein; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Putative
uncharacterized protein - Alteromonas macleodii 'Deep
ecotype'
Length = 309
Score = 32.7 bits (71), Expect = 9.8
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 131 GHAPIVIASVYLPPDKIVLSSDIEALLGMGSSVIL 235
G +V A LPPDKIVL S + ++G SSV+L
Sbjct: 235 GFGLMVAAGPKLPPDKIVLISTLTPIVGYVSSVLL 269
>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx
mori|Rep: Reverse transcriptase - Bombyx mori (Silk
moth)
Length = 1076
Score = 32.7 bits (71), Expect = 9.8
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 224 SVILAGDLNCKHVRWNTHTTTPNGRRLD 307
SVILAGD N K V W + T GR L+
Sbjct: 121 SVILAGDFNAKSVAWGSPFTDARGRLLE 148
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,981,851
Number of Sequences: 1657284
Number of extensions: 13823230
Number of successful extensions: 37723
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 36247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37677
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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