Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0176
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    26   0.37 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   1.1  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   1.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   7.9  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 266 WNTHTTTPNGRRLDALVDDLAFDIVAPLTP 355
           +N H   PNG  + +L+D++++  +AP  P
Sbjct: 512 YNRHLVAPNGDHVISLIDEISY--MAPPAP 539


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 227 QSFPCRAAPRYHCLERSYPVE 165
           Q+  C  APRYH L+ + PV+
Sbjct: 300 QTAICFKAPRYHTLDITEPVK 320


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -3

Query: 516 GTESGARPSFITTGRW--SESNSETT 445
           G    ARP  +TT RW  + ++S TT
Sbjct: 40  GRRRAARPGVVTTPRWGCARASSATT 65


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 163 INGRDNDRRVSSQ 125
           +NG DN RR SS+
Sbjct: 227 VNGSDNSRRASSR 239


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 92   SNIEASVCRISLTGHAPIVIASV 160
            SNI+  V +I  TG+A I++A +
Sbjct: 966  SNIQLIVAQILSTGYALIMMAVI 988


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 92   SNIEASVCRISLTGHAPIVIASV 160
            SNI+  V +I  TG+A I++A +
Sbjct: 966  SNIQLIVAQILSTGYALIMMAVI 988


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 92   SNIEASVCRISLTGHAPIVIASV 160
            SNI+  V +I  TG+A I++A +
Sbjct: 966  SNIQLIVAQILSTGYALIMMAVI 988


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 92   SNIEASVCRISLTGHAPIVIASV 160
            SNI+  V +I  TG+A I++A +
Sbjct: 966  SNIQLIVAQILSTGYALIMMAVI 988


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +3

Query: 6   TTGSLLVVVVPSFTIDEPCTASHSTPPRFLTSKHQYV 116
           +T   L  V+P   +  P    H  PP F   +  +V
Sbjct: 6   STEKFLPTVLPHQEVPPPFGYYHEEPPLFYEERPDFV 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,599
Number of Sequences: 336
Number of extensions: 3083
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)