Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0176
(743 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 93 3e-19
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 83 5e-16
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 80 3e-15
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 80 4e-15
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 80 4e-15
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 72 1e-12
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 64 2e-10
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 64 2e-10
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 64 2e-10
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 62 8e-10
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 62 1e-09
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 61 2e-09
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 61 2e-09
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 60 3e-09
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 60 3e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 59 5e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 59 5e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 59 5e-09
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 57 2e-08
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 54 2e-07
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 44 2e-04
AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p pro... 29 5.1
AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,... 29 5.1
AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p pro... 29 6.7
AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA... 29 6.7
AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-P... 29 6.7
AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-P... 29 6.7
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 93.5 bits (222), Expect = 3e-19
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Frame = +2
Query: 29 GGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD-IEA 205
GGT I R + A ++++A+ I L + + +A+VY PP VL + ++
Sbjct: 65 GGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQFLDF 124
Query: 206 LLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLA--FDIVAPLTPTHYPLNIA 379
+G I AGD N KH W + P G++L + D V+P +PT++P ++
Sbjct: 125 FQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLN 184
Query: 380 HRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSV-PVTR 526
PD++D A+ KN++ L E + +L SDH PV++ L R ++V P TR
Sbjct: 185 KLPDLIDFAVTKNISRSLVKAECLPDLSSDHSPVLIHLRRYAENVKPPTR 234
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 82.6 bits (195), Expect = 5e-16
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 2/238 (0%)
Frame = +2
Query: 29 GGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEAL 208
GG I + +L PL A + ++ + I T PI +VY PP + + + +
Sbjct: 66 GGAAILIKNSLAHFPLTPIATAKVQLAPAVIE-TALGPISFGAVYCPPRFAWTTDEFKDI 124
Query: 209 LG-MGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHR 385
L + I+AGD N H W + G L LV + D +A PT YP
Sbjct: 125 LEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGS 184
Query: 386 PDILDIALLKNVTLRLHS-IEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHTLGISL 562
P +D AL K V L +H+ I V EL SDH P+V+ L S P ++ T + +
Sbjct: 185 PGYIDFALTKGV-LGIHANISAVVELSSDHLPLVITLDAGAISYPKMERLITRRT-NLEV 242
Query: 563 AEXXXXXXXXXXXXXXXXQDTAEAIDILT*HITSTLDRSSKQVVAEDFLHRFKLPDDI 736
+ QD +AI++LT +I S +++ + + R +P +I
Sbjct: 243 FQSQLESTLPLNTAINSGQDVDDAIELLTNNIKSAARLATRSISRQPAADRIPIPREI 300
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 80.2 bits (189), Expect = 3e-15
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Frame = +2
Query: 29 GGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD--IE 202
GGT I R + L+ + ++++ + L + +A+VY PP + +S D +E
Sbjct: 65 GGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-NGSTTLAAVYCPP-RFPISEDQFME 122
Query: 203 ALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRL-DALVD-DLAFDIVAPLTPTHYPLNI 376
+G I AGD N KH W + TP G++L +AL + D V+P PT++P +
Sbjct: 123 FFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPADP 182
Query: 377 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 493
PD++D A+ K+V + + E +++L SDH PV + +
Sbjct: 183 RKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNM 221
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 79.8 bits (188), Expect = 4e-15
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 4/177 (2%)
Frame = +2
Query: 29 GGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD--IE 202
GGT I R + L+ + ++++ + L + +A+VY PP + +S D +E
Sbjct: 65 GGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-NGSTTLAAVYCPP-RFPISEDQFME 122
Query: 203 ALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRL-DALVD-DLAFDIVAPLTPTHYPLNI 376
+G I AGD N KH W + +P G++L +AL + D V+P PT++P +
Sbjct: 123 FFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWPADP 182
Query: 377 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHT 547
PD++D A+ K+V + + E +++L SDH PV + + P V + ++ T
Sbjct: 183 RKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNMLTRPHIVDPPYRLTNFRT 239
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 79.8 bits (188), Expect = 4e-15
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Frame = +2
Query: 20 ARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISL-TGHAPIVIASVYLPPDKIVLSSD 196
+RGG VI R H PL P +N + + R+ L T + +A+VYLPP + + D
Sbjct: 65 SRGGSAVIIKSRLCHS-PL-TPISTN-DRQIARVHLQTSVGTVTVAAVYLPPAERWIVDD 121
Query: 197 IEALLG-MGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLN 373
+++ +G+ I GD N KH W + P G+ L ++ + ++A PT Y N
Sbjct: 122 FKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYN 181
Query: 374 IAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP 517
P LD + + ++ + EL SDH P++ L P P
Sbjct: 182 PLLTPSALDFFITCGYGMGRLDVQTLQELSSDHLPILAVLHATPLKKP 229
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 71.7 bits (168), Expect = 1e-12
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Frame = +2
Query: 29 GGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPD-KIVLSSDIEA 205
GG ++ R L P +I+ S +++ TG + +++Y P +I +
Sbjct: 67 GGVAVFVRTTLRHFPQRVIETRHIQLSSVKVA-TGLGDLQFSAIYCSPSTRIEERHFTDI 125
Query: 206 LLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHR 385
+ G ++ GD N +H W +P GR L + I+A +PT YP +H
Sbjct: 126 IRACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHT 185
Query: 386 PDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHT 547
P +D A+ + L +I +LDSDH P+++ + V + +V HT
Sbjct: 186 PSCIDFAVYHGIPDHLATITQSWDLDSDHLPLIISIETDSTHVNPSPRLVTKHT 239
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.1 bits (149), Expect = 2e-10
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Frame = +2
Query: 74 LDAPALSNIEASVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDL 247
+ + ++ I +S R +T API VY L + E LL S IL GD
Sbjct: 99 MQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDW 158
Query: 248 NCKHVRWNTHTTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVT 424
NCKH W + + GR L +++ DIVA TH+P + +P LD A+ K
Sbjct: 159 NCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFH 218
Query: 425 LRLHSIEVVSELDSDHRPVVMKL 493
+ EL SDH P+ + L
Sbjct: 219 TQKLKTYSTDELSSDHLPIQIVL 241
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.1 bits (149), Expect = 2e-10
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Frame = +2
Query: 74 LDAPALSNIEASVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDL 247
+ + ++ I +S R +T API VY L + E LL S IL GD
Sbjct: 99 MQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDW 158
Query: 248 NCKHVRWNTHTTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVT 424
NCKH W + + GR L +++ DIVA TH+P + +P LD A+ K
Sbjct: 159 NCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFH 218
Query: 425 LRLHSIEVVSELDSDHRPVVMKL 493
+ EL SDH P+ + L
Sbjct: 219 TQKLKTYSTDELSSDHLPIQIVL 241
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.1 bits (149), Expect = 2e-10
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Frame = +2
Query: 74 LDAPALSNIEASVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDL 247
+ + ++ I +S R +T API VY L + E LL S IL GD
Sbjct: 99 MQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDW 158
Query: 248 NCKHVRWNTHTTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVT 424
NCKH W + + GR L +++ DIVA TH+P + +P LD A+ K
Sbjct: 159 NCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFH 218
Query: 425 LRLHSIEVVSELDSDHRPVVMKL 493
+ EL SDH P+ + L
Sbjct: 219 TQKLKTYSTDELSSDHLPIQIVL 241
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 62.1 bits (144), Expect = 8e-10
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 20 ARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISL-TGHAPIVIASVYLPPDKIVLSSD 196
+RGG VI R H PL P +N + + R+ L T + +A+VYLPP + + D
Sbjct: 65 SRGGSAVIIKSRLCHS-PL-TPISTN-DRQIARVHLQTSVGTVTVAAVYLPPAERWIVDD 121
Query: 197 IEALLG-MGSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLN 373
+++ +G+ I GD N KH W + P G+ L ++ + ++A PT Y N
Sbjct: 122 FKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYN 181
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.7 bits (143), Expect = 1e-09
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 10/201 (4%)
Frame = +2
Query: 143 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRR 301
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 302 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 478
L +A+ D +I+A TH+P + P +D ++ K + I V++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSVADLSSDHLP 232
Query: 479 VVMKLGRAPDSVPVTR--TVVDWHTLGISLAEXXXXXXXXXXXXXXXXQDTAEAIDILT* 652
+++++ ++ + + + T I L + +D +AI+I
Sbjct: 233 ILLEINLDTSTLFLQKQNNNILKKTTNIELFKTVLERKILLNTEIRVAEDINDAINIFIK 292
Query: 653 HITSTLDRSSKQVVAEDFLHR 715
+I + D S+ D L R
Sbjct: 293 NIKDSADESTPSPRIPDNLRR 313
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 60.9 bits (141), Expect = 2e-09
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 18/181 (9%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLP---- 169
RNDR +RGGG I L + IE +I+ ++ + I S+Y
Sbjct: 63 RNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSIYFAGNTS 122
Query: 170 ---PDKIVLS-----------SDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLD 307
P LS SD+ + + + ++ GD N +H W G+ L+
Sbjct: 123 KCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILN 182
Query: 308 ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVM 487
L D F I+ P PT+ P N + LD+ L N+ +L + V+ EL SDH PVV+
Sbjct: 183 ELSDLGKFSILYPTQPTYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVI 241
Query: 488 K 490
K
Sbjct: 242 K 242
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 60.9 bits (141), Expect = 2e-09
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 18/181 (9%)
Frame = +2
Query: 2 RNDRLTARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLP---- 169
RNDR +RGGG I L + IE +I+ ++ + I S+Y
Sbjct: 11 RNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSIYFAGNTS 70
Query: 170 ---PDKIVLS-----------SDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRLD 307
P LS SD+ + + + ++ GD N +H W G+ L+
Sbjct: 71 KCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILN 130
Query: 308 ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVM 487
L D F I+ P PT+ P N + LD+ L N+ +L + V+ EL SDH PVV+
Sbjct: 131 ELSDLGKFSILYPTQPTYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVI 189
Query: 488 K 490
K
Sbjct: 190 K 190
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 60.1 bits (139), Expect = 3e-09
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +2
Query: 143 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRR 301
IVIASVY PP L +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLRWLPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 302 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 478
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 173 LYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRFEKRISSGADLSSDHLP 232
Query: 479 VVMKL 493
+++++
Sbjct: 233 ILLEI 237
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 60.1 bits (139), Expect = 3e-09
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +2
Query: 143 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRR 301
IVIASVY PP +D+ E +G + +IL GD N KH +W G
Sbjct: 125 IVIASVYCPPSLSWSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAA 184
Query: 302 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 478
L DA+ D +IVA + TH+P + P +D ++ K + I + L SDH P
Sbjct: 185 LYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSICKRLGRYEKRISSSAHLSSDHLP 244
Query: 479 VVMKL 493
+++++
Sbjct: 245 ILLEI 249
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 59.3 bits (137), Expect = 5e-09
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Frame = +2
Query: 143 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRR 301
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 302 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 478
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 232
Query: 479 VVMKLGRAPDSVPVTR--TVVDWHTLGISLAEXXXXXXXXXXXXXXXXQDTAEAIDILT* 652
+++++ ++ + + + T I L + +D +AI+I
Sbjct: 233 ILLEINLDTSTLFLQKQNNNILKKTTNIELFKTVLERKILLNTEIRVAEDINDAINIFIK 292
Query: 653 HITSTLDRSSKQVVAEDFLHR 715
+I + D S+ D L R
Sbjct: 293 NIKDSADESTPSPRIPDNLRR 313
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 59.3 bits (137), Expect = 5e-09
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Frame = +2
Query: 143 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRR 301
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 75 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 134
Query: 302 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 478
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 135 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 194
Query: 479 VVMKLGRAPDSVPVTR--TVVDWHTLGISLAEXXXXXXXXXXXXXXXXQDTAEAIDILT* 652
+++++ ++ + + + T I L + +D +AI+I
Sbjct: 195 ILLEINLDTSNLFLQKQNNNILKKTTNIELFKTVLERKILLNTEIRVAEDINDAINIFIK 254
Query: 653 HITSTLDRSSKQVVAEDFLHR 715
+I + D S+ D L R
Sbjct: 255 NIKDSADESTPSPRIPDNLRR 275
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 59.3 bits (137), Expect = 5e-09
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Frame = +2
Query: 143 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRR 301
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 302 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 478
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 232
Query: 479 VVMKLGRAPDSVPVTR--TVVDWHTLGISLAEXXXXXXXXXXXXXXXXQDTAEAIDILT* 652
+++++ ++ + + + T I L + +D +AI+I
Sbjct: 233 ILLEINLDTSNLFLQKQNNNILKKTTNIELFKTVLERKILLNTEIRVAEDINDAINIFIK 292
Query: 653 HITSTLDRSSKQVVAEDFLHR 715
+I + D S+ D L R
Sbjct: 293 NIKDSADESTPSPRIPDNLRR 313
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 57.2 bits (132), Expect = 2e-08
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Frame = +2
Query: 95 NIEASV-CR-ISLTGHAPIVIASVYLPPDKIVLSSDI-EALLGMGSSVILAGDLNCKHVR 265
NI +S+ C + L I I + Y+PP +I SSDI E L + S IL GDLN
Sbjct: 83 NINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISEILQNLNGSTILLGDLNSWSPL 142
Query: 266 WNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIE 445
W + T G++++ ++ + + ++ +PTH L+ + +DI+L+ + S
Sbjct: 143 WGSPRTNTRGKKIETVILENSLIVLNDGSPTH--LSTHNTFTHIDISLISPQIAHMCSWS 200
Query: 446 VVSEL-DSDHRPVVMKLG---RAPDSVPVTRTVVD 538
+ L SDH P+ + + R +++P+ + D
Sbjct: 201 ISDNLHGSDHFPITIHINTPTRPDNTLPLPKYKTD 235
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 54.4 bits (125), Expect = 2e-07
Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 3/175 (1%)
Frame = +2
Query: 200 EALLGMGSSVILAGDLNCKHVRWNTHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNI 376
E LG + IL GD N KH +W G L +A+ D +I+A TH+P +
Sbjct: 23 EKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDT 82
Query: 377 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTR--TVVDWHTL 550
P +D ++ K + I ++L SDH P+++++ ++ + + + T
Sbjct: 83 RKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEINLDTSTLFLQKQNNNILKKTT 142
Query: 551 GISLAEXXXXXXXXXXXXXXXXQDTAEAIDILT*HITSTLDRSSKQVVAEDFLHR 715
I L + +D +AI+I +I + D S+ D L R
Sbjct: 143 NIELFKTVLERKILLNTEIRVAEDINDAINIFIKNIKDSADESTPSPRIPDNLRR 197
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 44.0 bits (99), Expect = 2e-04
Identities = 32/161 (19%), Positives = 70/161 (43%), Gaps = 2/161 (1%)
Frame = +2
Query: 17 TARGGGTVIYYRRALHCVPLDAPALSNIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD 196
T R GG + +++ L+ I+ I++ + I S Y+ P K + +
Sbjct: 59 TNRFGGVRLLVHKSIQHTVLNI----TIDIEAIAINIESKLKLNIFSTYISPTKNITNQT 114
Query: 197 IEALLGMGSSV-ILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLN 373
+ + + ++ GD N H W + TT G+ +D++ ++ +PTH+ +
Sbjct: 115 LHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFSTH 174
Query: 374 IAHRPDILDIALLKNVTLRLHSIEVVSEL-DSDHRPVVMKL 493
+ +D+ L + +++++L SDH P++ L
Sbjct: 175 NTYTH--IDLTLCSPILAPHAKWKILNDLHGSDHFPIITTL 213
>AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p
protein.
Length = 224
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 218 GSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAP 346
G S+ LA D+N K T T NG RLD++ LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,
isoform A protein.
Length = 224
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 218 GSSVILAGDLNCKHVRWNTHTTTPNGRRLDALVDDLAFDIVAP 346
G S+ LA D+N K T T NG RLD++ LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p
protein.
Length = 844
Score = 29.1 bits (62), Expect = 6.7
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 407 LLKNVTLRLHSIEVVSELDSDHRPVVMK--LGRAPD-SVPVTRTVVDWHTLGI 556
++KNV RL ++V+ SDHR V++ L + P S V + +HTL +
Sbjct: 267 MVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNL 319
>AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA
protein.
Length = 844
Score = 29.1 bits (62), Expect = 6.7
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 407 LLKNVTLRLHSIEVVSELDSDHRPVVMK--LGRAPD-SVPVTRTVVDWHTLGI 556
++KNV RL ++V+ SDHR V++ L + P S V + +HTL +
Sbjct: 267 MVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNL 319
>AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-PB,
isoform B protein.
Length = 653
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 158 VYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGR 298
V+ PD LSSD+ LLG+ + + + L C + + T P R
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYPRHR 274
>AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-PA,
isoform A protein.
Length = 804
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 158 VYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNTHTTTPNGR 298
V+ PD LSSD+ LLG+ + + + L C + + T P R
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYPRHR 274
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,934,120
Number of Sequences: 53049
Number of extensions: 652338
Number of successful extensions: 1631
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -