Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0175
         (687 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883...    30   2.0  
07_03_1457 - 26674128-26674783,26675741-26675962,26676065-26676362     29   4.6  

>04_04_1596 +
           34684943-34686340,34688085-34688175,34688290-34688354,
           34688530-34688581,34688747-34688829,34688942-34689035,
           34689468-34690051
          Length = 788

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 558 STYDNSFLQPLEL*KQACHQKNVGTDR*VHEHCIFGWRDR 677
           S  D  F++     +    +K+VG+D  V   C+FG+RD+
Sbjct: 406 SCADGGFVEKKRRPRMQSSRKSVGSDHLVVPECVFGFRDK 445


>07_03_1457 - 26674128-26674783,26675741-26675962,26676065-26676362
          Length = 391

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 364 KQKTNSILCRVIISILSFGR*DSVILLFLDKTLLWVRALFRR 239
           +Q+    + R +  +  FG  D +  LF +KTL WVR L  R
Sbjct: 172 EQERKEAMARSVFMVGEFGGNDYLHPLFQNKTLEWVRPLVPR 213


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,973,722
Number of Sequences: 37544
Number of extensions: 295657
Number of successful extensions: 477
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)