Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0175
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113649-1|AAM29654.1|  701|Drosophila melanogaster SD12335p pro...    29   6.0  
AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA...    29   6.0  

>AY113649-1|AAM29654.1|  701|Drosophila melanogaster SD12335p
           protein.
          Length = 701

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +3

Query: 408 LEIENPTFSLI---QPNETITSKFSDNYDQLIDIKKFSFKINPKPCKRYPERFSTYDN 572
           LE++ P    +   +P +     FSD+ D   ++++F  + + +P +  PE F  YD+
Sbjct: 339 LEVDKPRNKKLIKKRPKKKAKLGFSDDEDSDDEVEEFEEESDAEPVEEIPETFVDYDS 396


>AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA
            protein.
          Length = 1465

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +3

Query: 408  LEIENPTFSLI---QPNETITSKFSDNYDQLIDIKKFSFKINPKPCKRYPERFSTYDN 572
            LE++ P    +   +P +     FSD+ D   ++++F  + + +P +  PE F  YD+
Sbjct: 1103 LEVDKPRNKKLTKKRPKKKAKLGFSDDEDSDDEVEEFDEESDAEPVEEIPETFVDYDS 1160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,230,925
Number of Sequences: 53049
Number of extensions: 550426
Number of successful extensions: 1327
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)