Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0170
         (351 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   1.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   2.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   2.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.8  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    20   6.4  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +2

Query: 134 WHSSSLVGAFKPTLAQVRLAQS--SIRLLKEL 223
           W +S      +PTL+ +R  +S  S R+++EL
Sbjct: 273 WQNSLRAADIQPTLSSIRHPESNPSERVMREL 304


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -3

Query: 133 ATPVHPLFTI*ED*TKLKYFKIIYYFTLKFRTQVLN 26
           +TP+  + TI +    +    + Y+F + FR ++LN
Sbjct: 63  STPLAKITTILQRYCSVLLVFLTYFFNILFRKKLLN 98



 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 319 TFHFSVNSHGVSCSC 275
           TFH    +HG S  C
Sbjct: 140 TFHLIYEAHGFSYKC 154


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -3

Query: 133 ATPVHPLFTI*ED*TKLKYFKIIYYFTLKFRTQVLN 26
           +TP+  + TI +    +    + Y+F + FR ++LN
Sbjct: 59  STPLAKITTILQRYCSVLLVFLTYFFNILFRKKLLN 94



 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 319 TFHFSVNSHGVSCSC 275
           TFH    +HG S  C
Sbjct: 136 TFHLIYEAHGFSYKC 150


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 287 LLFLPIIVNHIVSTLWAYHEPQAP 216
           ++++      I++ LWA  +PQ+P
Sbjct: 271 VMYIACSTPFILAQLWATWDPQSP 294


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 79   YFKIIYYFT 53
            YFKI+ YFT
Sbjct: 1397 YFKIVCYFT 1405


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +2

Query: 233 GRPTGWKQC 259
           G+PT W++C
Sbjct: 881 GKPTCWREC 889


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 59  IVDYFKVF*FSLIFLY 106
           + ++ K+F +SLIFL+
Sbjct: 167 VANFNKIFGWSLIFLF 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,719
Number of Sequences: 336
Number of extensions: 1563
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)