Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0170
         (351 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0327 - 2241228-2242509,2243227-2243247,2243299-2243614,224...    29   0.78 
05_03_0104 - 8426374-8426542,8426656-8426828,8427020-8427103,842...    27   4.1  
09_04_0382 + 17135554-17136468,17136762-17136833,17137675-171377...    26   7.2  
07_03_0749 + 21212463-21212911,21212976-21213305,21213336-212134...    26   7.2  

>02_01_0327 -
           2241228-2242509,2243227-2243247,2243299-2243614,
           2244232-2244496,2245887-2245985
          Length = 660

 Score = 29.5 bits (63), Expect = 0.78
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 158 AFKPTLAQVRLAQSSIRLLKELEARGRPTG--WKQCGSLLLARTRD 289
           A +P LA V  A    +L +  EA  RP G  W +CG+++L   +D
Sbjct: 281 ADRPRLAPVAAAMVDAQLPRAGEAIYRPQGHGWGRCGAMILGGGKD 326


>05_03_0104 -
           8426374-8426542,8426656-8426828,8427020-8427103,
           8427110-8427205,8427530-8427616,8428639-8428767,
           8428922-8429098,8429185-8429295,8429642-8429761,
           8430767-8432427,8432485-8432867,8433707-8434470,
           8434532-8434813,8436158-8436493
          Length = 1523

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 125 GSRWHSSSLVGAFKPT-LAQVRLAQSSIRLLKELEARGRPTGWKQCGSLLLARTR 286
           GSR       G  +P+ +  + ++Q S    + L+  G   G + C SLLL   R
Sbjct: 99  GSRHDDGGGSGVVRPSGVTSIPVSQKSTNPFQGLDLAGERQGQQSCASLLLQAKR 153


>09_04_0382 +
           17135554-17136468,17136762-17136833,17137675-17137704,
           17138744-17138817,17140022-17140367
          Length = 478

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -1

Query: 294 MGSLVLANNSEPHCFHPVGLPRASSSLRSLIEDWASLT*ASVGLNAPT 151
           MG   L N   P    PVGLP A+ ++++ +  + S    +  L++PT
Sbjct: 213 MGDPALGNGLMPRAV-PVGLPGAAVAMQTAVNQFDSGDKGNSDLSSPT 259


>07_03_0749 +
           21212463-21212911,21212976-21213305,21213336-21213436,
           21213758-21213883,21213962-21214083,21214177-21214450,
           21214767-21215004,21215101-21215248,21215400-21215732
          Length = 706

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 203 LRTGQASPEQVLA*MLQQGLMNASDSRA 120
           +RT  A+P+QV A  L +G +NAS  RA
Sbjct: 75  VRTAGAAPDQVYALALCRGDVNASACRA 102


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,492,264
Number of Sequences: 37544
Number of extensions: 169164
Number of successful extensions: 430
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)