Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0170
         (351 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p pro...    77   5e-15
AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA ...    77   5e-15
BT001625-1|AAN71380.1|  907|Drosophila melanogaster RE37361p pro...    41   4e-04
AE013599-2554|AAF57796.1|  894|Drosophila melanogaster CG6385-PA...    41   4e-04
X14569-1|CAA32707.1|  490|Drosophila melanogaster protein ( Dros...    30   0.72 
X12506-1|CAA31024.1|  490|Drosophila melanogaster twist protein ...    30   0.72 
BT025192-1|ABF17883.1|  490|Drosophila melanogaster FI01303p pro...    30   0.72 
AY118454-1|AAM49823.1|  489|Drosophila melanogaster AT17310p pro...    30   0.72 
AY075213-1|AAL68080.1|  489|Drosophila melanogaster AT15089p pro...    30   0.72 
AE013599-3525|ABC66041.1|  490|Drosophila melanogaster CG2956-PB...    30   0.72 
AE013599-3524|AAF46941.1|  490|Drosophila melanogaster CG2956-PA...    30   0.72 

>AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p
           protein.
          Length = 939

 Score = 77.4 bits (182), Expect = 5e-15
 Identities = 32/72 (44%), Positives = 49/72 (68%)
 Frame = +2

Query: 134 WHSSSLVGAFKPTLAQVRLAQSSIRLLKELEARGRPTGWKQCGSLLLARTRDPMTVYRKM 313
           W +  L G F+P+  +++LA+ SI L+K L   G PTGW+  GSL LAR+ D MT + +M
Sbjct: 110 WTACGLAGRFEPSYTELKLAEYSIDLIKRLAENGLPTGWRPVGSLNLARSWDRMTAFNRM 169

Query: 314 KSQSVSWSIDCD 349
           KSQ+++W + C+
Sbjct: 170 KSQALAWGMHCE 181


>AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA
           protein.
          Length = 939

 Score = 77.4 bits (182), Expect = 5e-15
 Identities = 32/72 (44%), Positives = 49/72 (68%)
 Frame = +2

Query: 134 WHSSSLVGAFKPTLAQVRLAQSSIRLLKELEARGRPTGWKQCGSLLLARTRDPMTVYRKM 313
           W +  L G F+P+  +++LA+ SI L+K L   G PTGW+  GSL LAR+ D MT + +M
Sbjct: 110 WTACGLAGRFEPSYTELKLAEYSIDLIKRLAENGLPTGWRPVGSLNLARSWDRMTAFNRM 169

Query: 314 KSQSVSWSIDCD 349
           KSQ+++W + C+
Sbjct: 170 KSQALAWGMHCE 181


>BT001625-1|AAN71380.1|  907|Drosophila melanogaster RE37361p
           protein.
          Length = 907

 Score = 41.1 bits (92), Expect = 4e-04
 Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +2

Query: 125 GSRWHSSSLVGAFKPTLAQVRLAQSSIRLLKELEARGR-PTGWKQCGSLLLARTRDPMTV 301
           G+ WH++ L+   +P    ++L  +S R+L++LE       GW Q G + +A     +  
Sbjct: 86  GTTWHTAGLLWRLRPNDVDIQLLANSRRMLQQLEEETELDPGWIQNGGIFIAHNETRLDE 145

Query: 302 YRKMKSQSVSWSID 343
           YR++ +   +  I+
Sbjct: 146 YRRLATVGSALGIE 159


>AE013599-2554|AAF57796.1|  894|Drosophila melanogaster CG6385-PA
           protein.
          Length = 894

 Score = 41.1 bits (92), Expect = 4e-04
 Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +2

Query: 125 GSRWHSSSLVGAFKPTLAQVRLAQSSIRLLKELEARGR-PTGWKQCGSLLLARTRDPMTV 301
           G+ WH++ L+   +P    ++L  +S R+L++LE       GW Q G + +A     +  
Sbjct: 73  GTTWHTAGLLWRLRPNDVDIQLLANSRRMLQQLEEETELDPGWIQNGGIFIAHNETRLDE 132

Query: 302 YRKMKSQSVSWSID 343
           YR++ +   +  I+
Sbjct: 133 YRRLATVGSALGIE 146


>X14569-1|CAA32707.1|  490|Drosophila melanogaster protein (
           Drosophila melanogastertwist mRNA. ).
          Length = 490

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 188 LAQSSIRLLKELEARGRPTGWKQCGSLLLA 277
           L+ S I LLK LEA+G P+ +    SLL A
Sbjct: 417 LSSSDISLLKALEAQGSPSAYGSASSLLSA 446


>X12506-1|CAA31024.1|  490|Drosophila melanogaster twist protein
           protein.
          Length = 490

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 188 LAQSSIRLLKELEARGRPTGWKQCGSLLLA 277
           L+ S I LLK LEA+G P+ +    SLL A
Sbjct: 417 LSSSDISLLKALEAQGSPSAYGSASSLLSA 446


>BT025192-1|ABF17883.1|  490|Drosophila melanogaster FI01303p
           protein.
          Length = 490

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 188 LAQSSIRLLKELEARGRPTGWKQCGSLLLA 277
           L+ S I LLK LEA+G P+ +    SLL A
Sbjct: 417 LSSSDISLLKALEAQGSPSAYGSASSLLSA 446


>AY118454-1|AAM49823.1|  489|Drosophila melanogaster AT17310p
           protein.
          Length = 489

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 188 LAQSSIRLLKELEARGRPTGWKQCGSLLLA 277
           L+ S I LLK LEA+G P+ +    SLL A
Sbjct: 416 LSSSDISLLKALEAQGSPSAYGSASSLLSA 445


>AY075213-1|AAL68080.1|  489|Drosophila melanogaster AT15089p
           protein.
          Length = 489

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 188 LAQSSIRLLKELEARGRPTGWKQCGSLLLA 277
           L+ S I LLK LEA+G P+ +    SLL A
Sbjct: 416 LSSSDISLLKALEAQGSPSAYGSASSLLSA 445


>AE013599-3525|ABC66041.1|  490|Drosophila melanogaster CG2956-PB,
           isoform B protein.
          Length = 490

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 188 LAQSSIRLLKELEARGRPTGWKQCGSLLLA 277
           L+ S I LLK LEA+G P+ +    SLL A
Sbjct: 417 LSSSDISLLKALEAQGSPSAYGSASSLLSA 446


>AE013599-3524|AAF46941.1|  490|Drosophila melanogaster CG2956-PA,
           isoform A protein.
          Length = 490

 Score = 30.3 bits (65), Expect = 0.72
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 188 LAQSSIRLLKELEARGRPTGWKQCGSLLLA 277
           L+ S I LLK LEA+G P+ +    SLL A
Sbjct: 417 LSSSDISLLKALEAQGSPSAYGSASSLLSA 446


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,674,789
Number of Sequences: 53049
Number of extensions: 286883
Number of successful extensions: 662
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)