Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0169
         (588 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F2D309 Cluster: PREDICTED: similar to OTTXETP000...    35   1.2  
UniRef50_UPI0000498C56 Cluster: hypothetical protein 73.t00024; ...    34   2.1  
UniRef50_Q4UI21 Cluster: Dynein heavy chain, putative; n=2; Thei...    33   6.5  
UniRef50_A7RJV8 Cluster: Predicted protein; n=2; Nematostella ve...    33   6.5  

>UniRef50_UPI0000F2D309 Cluster: PREDICTED: similar to
           OTTXETP00000002159; n=1; Monodelphis domestica|Rep:
           PREDICTED: similar to OTTXETP00000002159 - Monodelphis
           domestica
          Length = 340

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +2

Query: 275 IIPVHASIKYSNTNYLHLIYPLHNT*TTETIVEHKN*HPTHDLVHKLDNVTSSR-KYLNI 451
           IIP  A  K+      HL+Y LH        ++ +  H T  +VH++DN T +R K LN+
Sbjct: 123 IIPYRARRKHLQ----HLLYHLH------PFLQRQQIHYTIYVVHQMDNFTFNRAKLLNV 172

Query: 452 AYDVLMRTFKWT 487
            Y   M+   WT
Sbjct: 173 GYREAMKENDWT 184


>UniRef50_UPI0000498C56 Cluster: hypothetical protein 73.t00024;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 73.t00024 - Entamoeba histolytica HM-1:IMSS
          Length = 424

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
 Frame = +2

Query: 389 PTHDLVHKLDNVTSSRKYLNIAYDVLMRTFKWTRPRKCSRLILQKGIFNV---LIAGTEL 559
           P   ++ K+    +S   L +AY +L   F+W  P K  +++LQ  IF +   LI G  +
Sbjct: 300 PVPFVIRKVVTTVASGNTL-LAYSILGLFFEWKIPLKYIKVVLQVAIFKITVGLIVGLSI 358

Query: 560 PLATG 574
            L+TG
Sbjct: 359 YLSTG 363


>UniRef50_Q4UI21 Cluster: Dynein heavy chain, putative; n=2;
            Theileria|Rep: Dynein heavy chain, putative - Theileria
            annulata
          Length = 3283

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -1

Query: 333  YIKCR*FVLEYFIDA*TGIIEQSIYTPFLWSKVYDEDQNQI 211
            Y+KC  F+L   +   + II + +Y PF WSK Y+ + N +
Sbjct: 2979 YLKCSRFILLKCVVIHSIIILRQVYIPFGWSKKYNFNTNDL 3019


>UniRef50_A7RJV8 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 125

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 247 KKWCVNALLNYSGSRINKVF*YKLSTFNI 333
           KKWCVN   N+   R+NK+   + + FN+
Sbjct: 40  KKWCVNMFENWRADRVNKITAKESTIFNV 68


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,289,421
Number of Sequences: 1657284
Number of extensions: 10524850
Number of successful extensions: 19517
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19509
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)