Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0169
         (588 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    25   1.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   4.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   5.5  

>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 588 WRPGRPVANGSSVP 547
           W PG+ +ANG+ VP
Sbjct: 146 WHPGKTLANGTRVP 159


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 285 TGIIEQSIYTPFLWSKVYD 229
           TG+ + SI  P LW+ +YD
Sbjct: 644 TGVPQGSILGPTLWNVMYD 662


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 282 GIIEQSIYTPFLWSKVYD 229
           G+ ++SI  P LW+ +YD
Sbjct: 639 GVPQESILGPTLWNVMYD 656


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,855
Number of Sequences: 2352
Number of extensions: 11689
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)