Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0164
         (494 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    36   0.50 
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   0.87 
UniRef50_Q950Q1 Cluster: Orf203; n=1; Spizellomyces punctatus|Re...    33   4.6  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 35.9 bits (79), Expect = 0.50
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 467 RWLDGFTAHLMLSGYWS 417
           RW+D  TAHL+LSGYWS
Sbjct: 158 RWVDELTAHLVLSGYWS 174


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 0.87
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -3

Query: 282 WYLPVRTHKRSYHQ 241
           WYLP RTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_Q950Q1 Cluster: Orf203; n=1; Spizellomyces punctatus|Rep:
           Orf203 - Spizellomyces punctatus
          Length = 203

 Score = 32.7 bits (71), Expect = 4.6
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 78  YSLDVCSRFYDIITYTILLLKSF 10
           Y LD+C+RFY +ITY  + L +F
Sbjct: 76  YFLDICNRFYRVITYIFVTLYNF 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,906,845
Number of Sequences: 1657284
Number of extensions: 7033412
Number of successful extensions: 11927
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11921
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)