Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0161
         (725 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g22180.1 68415.m02634 hydroxyproline-rich glycoprotein family...    29   4.1  
At1g66030.1 68414.m07494 cytochrome P450-related weak similarity...    29   4.1  

>At2g22180.1 68415.m02634 hydroxyproline-rich glycoprotein family
           protein
          Length = 291

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 205 RRSKHPVFKKKAKCSKTIIFYFI 273
           +RSK+P   KK  CSK ++++FI
Sbjct: 103 KRSKNPEKNKKKGCSKRLLWFFI 125


>At1g66030.1 68414.m07494 cytochrome P450-related weak similarity to
           cytochrome P450 [Catharanthus roseus] GI:4688670
          Length = 167

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 9   LFGVAAM*VAFRICYLVFFYLLLRRA-NYLLFK 104
           L G+    +AF +C+L+F+Y L+++  +Y+L K
Sbjct: 3   LIGLIEAFIAF-VCFLIFYYFLIKKPYSYILIK 34


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,662,641
Number of Sequences: 28952
Number of extensions: 317710
Number of successful extensions: 629
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)