Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0158
(614 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 290 4e-79
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 290 6e-79
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 290 6e-79
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 288 2e-78
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 287 3e-78
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 287 3e-78
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 282 1e-76
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 282 1e-76
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 282 1e-76
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 263 7e-71
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 217 6e-57
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 179 2e-45
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 153 1e-37
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 119 2e-27
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 115 2e-26
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 5e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 79 2e-15
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 77 7e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 75 5e-14
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.086
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 31 0.61
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 31 0.61
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.4
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 28 4.3
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.7
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 5.7
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.5
At3g05750.1 68416.m00646 expressed protein 27 7.5
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 9.9
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 9.9
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 27 9.9
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 290 bits (712), Expect = 4e-79
Identities = 140/171 (81%), Positives = 146/171 (85%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 274
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 275 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 454
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 455 MFETFNTPAMYVAIQAVLSLYASRSYHRYRAGLPRRCLPTPCPIYQGYPTP 607
MFETFNTPAMYVAIQAVLSLYAS T PIY+GY P
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 290 bits (711), Expect = 6e-79
Identities = 140/171 (81%), Positives = 145/171 (84%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 274
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 275 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 454
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 455 MFETFNTPAMYVAIQAVLSLYASRSYHRYRAGLPRRCLPTPCPIYQGYPTP 607
MFETFNTPAMYVAIQAVLSLYAS T PIY+GY P
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 290 bits (711), Expect = 6e-79
Identities = 140/171 (81%), Positives = 145/171 (84%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 274
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 275 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 454
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 455 MFETFNTPAMYVAIQAVLSLYASRSYHRYRAGLPRRCLPTPCPIYQGYPTP 607
MFETFNTPAMYVAIQAVLSLYAS T PIY+GY P
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 288 bits (707), Expect = 2e-78
Identities = 139/171 (81%), Positives = 145/171 (84%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 274
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 275 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 454
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 455 MFETFNTPAMYVAIQAVLSLYASRSYHRYRAGLPRRCLPTPCPIYQGYPTP 607
MFETFN PAMYVAIQAVLSLYAS T PIY+GY P
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 287 bits (705), Expect = 3e-78
Identities = 138/171 (80%), Positives = 144/171 (84%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 274
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 275 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 454
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 455 MFETFNTPAMYVAIQAVLSLYASRSYHRYRAGLPRRCLPTPCPIYQGYPTP 607
MFETFN PAMYVAIQAVLSLYAS T PIY+GY P
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 287 bits (705), Expect = 3e-78
Identities = 138/171 (80%), Positives = 144/171 (84%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 274
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 275 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 454
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 455 MFETFNTPAMYVAIQAVLSLYASRSYHRYRAGLPRRCLPTPCPIYQGYPTP 607
MFETFN PAMYVAIQAVLSLYAS T PIY+GY P
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 282 bits (692), Expect = 1e-76
Identities = 126/143 (88%), Positives = 137/143 (95%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 274
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 275 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 454
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 455 MFETFNTPAMYVAIQAVLSLYAS 523
MFETFN+PAMYVAIQAVLSLYAS
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYAS 147
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/30 (66%), Positives = 21/30 (70%)
Frame = +3
Query: 525 GRTTGIVLDSRDGVSPHRAPSTKDTPLPHA 614
GRTTGIVLDS DGVS H P + LPHA
Sbjct: 148 GRTTGIVLDSGDGVS-HTVPIYEGFSLPHA 176
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 282 bits (692), Expect = 1e-76
Identities = 126/143 (88%), Positives = 137/143 (95%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 274
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 275 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 454
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 455 MFETFNTPAMYVAIQAVLSLYAS 523
MFETFN+PAMYVAIQAVLSLYAS
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYAS 147
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/30 (66%), Positives = 21/30 (70%)
Frame = +3
Query: 525 GRTTGIVLDSRDGVSPHRAPSTKDTPLPHA 614
GRTTGIVLDS DGVS H P + LPHA
Sbjct: 148 GRTTGIVLDSGDGVS-HTVPIYEGFSLPHA 176
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 282 bits (692), Expect = 1e-76
Identities = 126/143 (88%), Positives = 137/143 (95%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 274
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 275 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 454
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 455 MFETFNTPAMYVAIQAVLSLYAS 523
MFETFN+PAMYVAIQAVLSLYAS
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYAS 147
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/30 (66%), Positives = 21/30 (70%)
Frame = +3
Query: 525 GRTTGIVLDSRDGVSPHRAPSTKDTPLPHA 614
GRTTGIVLDS DGVS H P + LPHA
Sbjct: 148 GRTTGIVLDSGDGVS-HTVPIYEGFSLPHA 176
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 263 bits (644), Expect = 7e-71
Identities = 121/171 (70%), Positives = 141/171 (82%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 274
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 275 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 454
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 455 MFETFNTPAMYVAIQAVLSLYASRSYHRYRAGLPRRCLPTPCPIYQGYPTP 607
MFE+F P+MY+ IQAVLSLY+S T PIY+GY P
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYALP 175
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 217 bits (529), Expect = 6e-57
Identities = 104/166 (62%), Positives = 123/166 (74%)
Frame = +2
Query: 110 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 289
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 290 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 469
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 470 NTPAMYVAIQAVLSLYASRSYHRYRAGLPRRCLPTPCPIYQGYPTP 607
+ PAMYV++Q+VL LY+S L R T P+Y+GY P
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT-VPVYEGYALP 163
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 179 bits (435), Expect = 2e-45
Identities = 77/102 (75%), Positives = 93/102 (91%)
Frame = +2
Query: 218 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 397
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 398 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 523
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+AS
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHAS 102
Score = 34.7 bits (76), Expect = 0.049
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 525 GRTTGIVLDSRDGVSPHRAPSTKDTPLPHA 614
GRTTG VLDS DGVS + P + + LPHA
Sbjct: 103 GRTTGTVLDSGDGVS-YIVPIYEGSALPHA 131
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 153 bits (370), Expect = 1e-37
Identities = 68/139 (48%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
Frame = +2
Query: 110 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 283
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 284 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 463
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 464 TFNTPAMYVAIQAVLSLYA 520
+N +++ IQAVL+LYA
Sbjct: 127 KYNFAGVFIQIQAVLTLYA 145
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 119 bits (286), Expect = 2e-27
Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 22/165 (13%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 244
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 245 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 388
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 389 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 523
HP+LL E PLN + REK ++MFE + PA+++A VL+ +A+
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFAT 169
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 115 bits (277), Expect = 2e-26
Identities = 67/159 (42%), Positives = 92/159 (57%), Gaps = 21/159 (13%)
Frame = +2
Query: 107 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 232
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 233 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 403
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 404 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 520
TE+PL P +RE +I+FETFN P +Y+A+ +VL+L A
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAA 163
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 5e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 229
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 230 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 406
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 407 EAPLNPKANREK 442
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 79.0 bits (186), Expect = 2e-15
Identities = 56/140 (40%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Frame = +2
Query: 107 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 283
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 284 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 460
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 461 ETFNTPAMYVAIQAVLSLYA 520
ETFN Y + QAVLSLYA
Sbjct: 113 ETFNVSGFYASEQAVLSLYA 132
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 77.4 bits (182), Expect = 7e-15
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Frame = +2
Query: 110 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 289
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 290 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 451
+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 452 IMFETFNTPAMYVAIQAVLS 511
++FET+ PA+ + A S
Sbjct: 138 LLFETYGVPAVAFGVDAAFS 157
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 74.5 bits (175), Expect = 5e-14
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Frame = +2
Query: 110 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 289
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 290 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 469
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 470 NTPAMYVA-IQAVLSLY-ASR 526
++Y+A Q+++ LY ASR
Sbjct: 122 GFSSLYIAHPQSLVHLYEASR 142
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.086
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 231 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 94
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 31.1 bits (67), Expect = 0.61
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Frame = +2
Query: 353 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 502
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 503 VLSLYASR 526
VL+LYA+R
Sbjct: 241 VLALYAAR 248
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 31.1 bits (67), Expect = 0.61
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Frame = +2
Query: 353 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 502
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 503 VLSLYASR 526
VL+LYA+R
Sbjct: 241 VLALYAAR 248
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 254 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 434 REK 442
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 254 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 434 REK 442
REK
Sbjct: 225 REK 227
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +3
Query: 471 TRPPCTSPSKPCSRCTRPGRTTGIVLDSRDGVSPHRAPSTKDTP 602
T PP S P S RPG + G G+ PH P P
Sbjct: 20 TSPPAFPGSNPFSTTPRPGMSAG-PAQMNPGIHPHMYPPYHSLP 62
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 342 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 253
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 334 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 227
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 207 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 85
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 271
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 272 RG--ILTLKYPIEHGIVTNWDDMEK 340
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 393 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 235
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 403 H*GSPQPQGQQREDDPDHVRN 465
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 495 SKPCSRCTRPGRTTG 539
S C+RC RPG TTG
Sbjct: 591 SLKCTRCDRPGATTG 605
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 320 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 469
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,885,825
Number of Sequences: 28952
Number of extensions: 346824
Number of successful extensions: 1150
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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