Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0157
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.53 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.8  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   3.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   3.8  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   5.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   6.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 46   AEGFSYDFETSNGIRADAQGVATNGVQSQGSFAYKGD 156
            A GF   +E  + I+     V  +  +  G +AYKGD
Sbjct: 1673 AAGFLAYYEICHNIKTQGWTVVQDPNRRMGPYAYKGD 1709


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 320 WYVPSSTIPAASSRAF 273
           W V SST+ A +SRAF
Sbjct: 498 WLVLSSTVRAYASRAF 513


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 515 VPPPVSTWHRTPDPRASGSGNFN 583
           +P P S    TP PR  G+ N N
Sbjct: 409 LPSPGSDQRSTPSPRVYGNVNEN 431


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 122 SSPKAASPTRVTMVRTTVSLTPPTRTDTSP 211
           SSP+ ++PT   +VR  +    P R   +P
Sbjct: 92  SSPQTSAPTGPPIVRCALRKHKPNRKPRTP 121


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 132  LGLDTVSGYSLRISTNSVGGFEVVGEAFS 46
            L LD    Y LR++ ++  GF V    F+
Sbjct: 1552 LDLDPACWYHLRVTAHNNAGFNVAEYEFA 1580


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 119 VSSPKAASPTRVTMVRTTVSLTPPTRT 199
           +SSP A S      ++T V+  PP R+
Sbjct: 96  MSSPGAGSGNLSPQIQTQVARPPPARS 122


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 119 VSSPKAASPTRVTMVRTTVSLTPPTRT 199
           +SSP A S      ++T V+  PP R+
Sbjct: 96  MSSPGAGSGNLSPQIQTQVARPPPARS 122


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = +2

Query: 119 VSSPKAASPTRVTMVRTTVSLTPPTRTDTSPRAR--IFPLLPQSP 247
           V S     PT  T  RTT++    T+  T P  +  +    PQ+P
Sbjct: 155 VISSTPLPPTTSTTTRTTLTTKFTTKPSTKPTNKPVVVTKPPQAP 199


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 543 ERRIPGLRVLVT 578
           +RR PGLRVL++
Sbjct: 88  KRRFPGLRVLLS 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,884
Number of Sequences: 336
Number of extensions: 2440
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)