Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0157
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 33 0.19
12_01_0476 + 3738526-3738567,3738695-3738739,3739240-3739601,373... 32 0.44
04_03_0904 + 20717005-20718087 31 0.58
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 31 1.0
09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450... 30 1.8
08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150 30 1.8
01_01_0219 + 1863478-1864041,1864459-1865109 29 2.4
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 29 3.1
04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547... 29 4.1
01_06_1391 + 36992276-36992476,36992609-36992794,36993215-369933... 29 4.1
11_06_0326 - 22382001-22383248 28 5.4
08_02_1168 + 24853895-24854216,24854264-24854286,24856102-248561... 28 5.4
01_06_0802 + 32087661-32087965,32088106-32088220,32088302-320884... 28 5.4
08_02_1365 - 26423915-26423953,26424409-26424492,26424543-264245... 28 7.2
04_04_1265 - 32231511-32231813,32231906-32232024,32232511-322327... 28 7.2
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 28 7.2
03_03_0014 + 13749178-13750695 28 7.2
09_06_0138 + 21084679-21085437 27 9.5
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 27 9.5
02_05_0363 - 28297295-28298167 27 9.5
02_01_0016 + 110796-110979,111252-111768,111847-112213 27 9.5
01_06_1330 - 36361275-36361448,36361778-36361973,36362248-363623... 27 9.5
>03_03_0246 + 15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 485 VSVAAEPD-SVVPPPVSTWHRTPDPRASG 568
+SVA D SV PP+S WH P P+ASG
Sbjct: 1855 LSVALPADLSVDTPPMSLWHPLPSPQASG 1883
>12_01_0476 +
3738526-3738567,3738695-3738739,3739240-3739601,
3739691-3740057,3740490-3740555,3741630-3741743
Length = 331
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/21 (52%), Positives = 19/21 (90%)
Frame = +3
Query: 522 LPSVPGTERRIPGLRVLVTST 584
LP+VPGTE+R+PG+ + ++S+
Sbjct: 120 LPNVPGTEQRVPGIPIQLSSS 140
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.5 bits (68), Expect = 0.58
Identities = 22/66 (33%), Positives = 27/66 (40%)
Frame = +2
Query: 44 PLKASPTTSKPPTEFVLMRRE*PLTVSSPKAASPTRVTMVRTTVSLTPPTRTDTSPRARI 223
P+K +P KPP E P PK P T + T TPPT T T P+
Sbjct: 37 PVKPAPKPEKPPKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTP--TPPTYTPT-PKPTP 93
Query: 224 FPLLPQ 241
P P+
Sbjct: 94 PPYTPK 99
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 484 HQHWLRSHRHQHRYRIRLQKHRFQHRRSQSYG 389
H H + H H+H + R Q+H H+R Q G
Sbjct: 130 HDHQSQRHHHRHHHHQR-QRHHHHHQRQQRRG 160
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 313 YHHQRYQRPHHGRSAPKISRFPRGL--GEEWEDARPGAGIRSRRRCK*YCSPDHRHPCRR 140
+HHQR QR P++ R P + GE+ ++ P I S + K P P R
Sbjct: 151 HHHQRQQRRGSRTRDPRVRRGPLRIPYGEDEKEEPPATPIASSNKNKREEPPTKHRPMAR 210
Query: 139 SCLGTG 122
G G
Sbjct: 211 PPGGGG 216
>09_02_0121 +
4502628-4502696,4503727-4503829,4504205-4504328,
4505963-4506306,4506383-4506487,4507907-4508288,
4509173-4509437,4509936-4510094,4511150-4511201,
4511266-4511462,4512865-4513350,4513797-4514093
Length = 860
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +1
Query: 31 NNEVTAEGFSYDFETSNGIRADAQGVATNGVQSQGSFAYKGDDGQDYSITYTADENGYQP 210
NN + A G S + + +G + V G QS+GS + G+D S ++ G
Sbjct: 731 NNTMVASGTSVESDDISGSQFKETNVYIAGQQSEGSGVWIPAPGRDISGLQPSNYYGLPL 790
Query: 211 QGAH 222
QG H
Sbjct: 791 QGQH 794
>08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150
Length = 383
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 434 PDPVAVLVPVASEPVLVVSVAAEPDSVVPPPVSTWHRTPDPRASGSGNFNAQTG 595
P PV + PVA PVL + A P S V P +T + SG+ +TG
Sbjct: 216 PPPVPAMAPVAPGPVLTSASATLPVSAVAP------QTDEKEQVASGSNTTETG 263
>01_01_0219 + 1863478-1864041,1864459-1865109
Length = 404
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 452 LVPVASEPVLVVSVAAEPDSVVPPPVSTWHRTPDP 556
LVP +S P++ S + E V PPP+ + TP P
Sbjct: 50 LVPSSSRPIMQPSPSPETPCVWPPPLPSSTPTPAP 84
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 487 NHQHWLRSHRHQHRYRIRLQKHRFQHRRSQSY 392
NH + H HQ +Y + + H HR+ Q Y
Sbjct: 149 NHHQQYQQHHHQQQYEHQNRIHFQHHRQQQQY 180
>04_04_0822 +
28352941-28353825,28353863-28354016,28354714-28354754,
28355060-28355310,28355411-28355591,28356138-28356323,
28356396-28356569,28356992-28357150,28357424-28357501,
28357612-28357748,28357980-28358044,28358115-28358148,
28358216-28358372,28359135-28359196,28360041-28360118,
28360940-28361042
Length = 914
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 488 SVAAEPDSVVPPPVSTWHRTPDPRASGS 571
S A+PDS PPP+ ++ P P +S +
Sbjct: 28 SRGAQPDSQPPPPIDSFRYNPRPSSSSA 55
>01_06_1391 +
36992276-36992476,36992609-36992794,36993215-36993327,
36993504-36993687,36993799-36993900
Length = 261
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 291 GLITGVLLQRFQDFLGDW 238
G+++GVLLQ F F+G W
Sbjct: 83 GMLSGVLLQLFYGFMGSW 100
>11_06_0326 - 22382001-22383248
Length = 415
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 296 PAASSRAFCSKDFKISSGIGGGVGRCAPW 210
PAA++ A KI++GI GG G P+
Sbjct: 369 PAAAAAAVVPSPVKIAAGISGGAGLLGPY 397
>08_02_1168 +
24853895-24854216,24854264-24854286,24856102-24856181,
24856286-24856369,24856843-24857074
Length = 246
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 156 RWSGLQYHLHRRRERIPAPGRASSHSSPNPRGNLEIFGAERP 281
R G Q RR R P PG ASS ++ P +L G P
Sbjct: 40 RGEGRQRRCGRREARRPPPGAASSAAAGRPDPSLAAVGRPDP 81
>01_06_0802 +
32087661-32087965,32088106-32088220,32088302-32088421,
32089678-32089788,32090084-32090122,32090965-32091069,
32091149-32091187,32091923-32092015
Length = 308
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 122 SSPKAASPTRVTMVRTTVSLTP 187
SSP AASP+R+ + R+T SL P
Sbjct: 42 SSPAAASPSRLPLWRSTGSLLP 63
>08_02_1365 -
26423915-26423953,26424409-26424492,26424543-26424577,
26425469-26425697
Length = 128
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 117 RCPVPRQLRLQG*RW--SGLQYHLHRRRERIPAPGRAS 224
RCP PR LQ RW GL++ L R R+ + G A+
Sbjct: 27 RCPDPRMHHLQIWRWLGFGLEWWLAAGRTRVRSGGAAA 64
>04_04_1265 -
32231511-32231813,32231906-32232024,32232511-32232721,
32232870-32232942,32233329-32233603,32233684-32233831,
32233906-32234143,32234325-32234457,32234852-32235045,
32235114-32235218,32235332-32236640
Length = 1035
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +1
Query: 10 VLXILRLNNEVTAEGFSYDFETSNGIRADAQGVATNGVQSQGSF--AYKG--DDGQDYSI 177
+L L +NE+ E F + I A + + + QG F YKG DDG++ +I
Sbjct: 488 ILGYLSASNELGDENLELPFVSFGEIAAATNNFSDDNMLGQGGFGKVYKGMLDDGKEVAI 547
Query: 178 TYTADENG 201
+ +G
Sbjct: 548 KRLSKGSG 555
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 434 PDPVAVLVPVASEPVLVVSVAAEPDSVVPPPVSTWHRTPDPRASGSGNFNAQTGY 598
P+P AVL P+AS V V + S PP + R+ PRA + +GY
Sbjct: 262 PNPRAVL-PIASSGVRAVFIGRARTSTPTPPHAKPARSAAPRAHRPPSSVMDSGY 315
>03_03_0014 + 13749178-13750695
Length = 505
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -2
Query: 604 VFIAGLS--VEVTRTRSPGIRRSVPG 533
V + GL+ VEVTR ++PG R +PG
Sbjct: 175 VVVPGLARRVEVTRAQAPGFFRDIPG 200
>09_06_0138 + 21084679-21085437
Length = 252
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 230 LLPQSPRKS*NLWSRTPVMRP 292
L+ PRK NLWSR P+ P
Sbjct: 226 LVASEPRKEVNLWSRRPMAPP 246
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 518 PPPVSTWHRTPDPRASGSGNFNAQTGYK 601
PPP+S RTP P SGS A + K
Sbjct: 45 PPPLSPTPRTPPPAGSGSHRAMAASSKK 72
>02_05_0363 - 28297295-28298167
Length = 290
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 186 RRRERIPAPGRASSHSSPNPRGNLEI 263
RR+++ PAP A++ SSP PR + +
Sbjct: 154 RRKKQPPAPAAAAAASSPPPRRSCRV 179
>02_01_0016 + 110796-110979,111252-111768,111847-112213
Length = 355
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 110 PLTVSSPKAASPTRVTMVRTTVSLTPPTRTDTSPRARIFPLLPQSPRKS*NLWSRTPVMR 289
PLT SP A + + + T + PP +SP + PL + PR+ +W TP
Sbjct: 155 PLTSPSPPALA-LAPSPIPTPIIAPPPV---SSPAPPLPPLWRRRPRRLPPIWRPTPPSL 210
Query: 290 PL 295
P+
Sbjct: 211 PV 212
>01_06_1330 -
36361275-36361448,36361778-36361973,36362248-36362325,
36362685-36362807,36363206-36363463,36363914-36364073,
36364702-36364812,36365159-36365429,36365514-36365663,
36366383-36367090
Length = 742
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +2
Query: 437 DPVAVLVPVASEPVLVVSVAAEPDSVVPPPVSTWHRTPDPRASG 568
DP + P AS P + A P +PPP P P G
Sbjct: 77 DPSLIPTPAASTPPASPTANASPPPSLPPPPPPLRPPPPPARLG 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,063,480
Number of Sequences: 37544
Number of extensions: 327471
Number of successful extensions: 1511
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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