Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0157
(638 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g16140.1 68415.m01850 expressed protein contains similarity t... 31 0.65
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 30 1.1
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 2.0
At2g33490.1 68415.m04105 hydroxyproline-rich glycoprotein family... 29 3.4
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 29 3.4
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 28 4.5
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 4.5
At5g27660.1 68418.m03315 DegP protease, putative similar to Seri... 28 6.0
At4g34440.1 68417.m04894 protein kinase family protein contains ... 27 7.9
At2g34080.1 68415.m04172 cysteine proteinase, putative contains ... 27 7.9
>At2g16140.1 68415.m01850 expressed protein contains similarity to
hypothetical proteins
Length = 311
Score = 31.1 bits (67), Expect = 0.65
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 5 RWCSXSS--D*TMKLPLKASPTTSKPPTEFVLMRRE*PLTVSSPKAASPTRVTMVRT 169
+WCS +S K A P+TS+PP+ V P+ V + KA + VT T
Sbjct: 179 KWCSQASVMSKRRKCDKAAQPSTSQPPSHGVEEAMSRPIGVKAAKAKAKKTVTKTTT 235
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +2
Query: 440 PVAVLVPVASEPVLVVSVAAEPDSVVPPPVSTWHRTPDPRASGSGNFNAQ 589
P +L PV + P L+ + P VPPP S + P G G Q
Sbjct: 160 PPGLLPPVTTPPGLLPPIINPPPVTVPPPSSGYPPYGPPSGGGGGGGGKQ 209
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = +2
Query: 35 MKLPLKASPTTSKPPTEFVLMRRE*PLTVSSPKAASPTRVTMVRTTVSLTPPTRTDTSP 211
+K P K P+T KPPT+ + P T P P T PPT T T P
Sbjct: 117 VKPPTKPPPSTPKPPTKPPPSTPKPPTTKPPPSTPKPPHHKPPPT--PCPPPTPTPTPP 173
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Frame = +2
Query: 32 TMKLPLKASPTTSKPPTEFVLMRRE*PLTVSSPKAASPTRVTMVRTTVSLTPPTRTDTSP 211
T K P K P+T KPPT + P + P P T + TPP T +P
Sbjct: 127 TPKPPTKPPPSTPKPPT------TKPPPSTPKPPHHKPPPTPCPPPTPTPTPPVVTPPTP 180
Query: 212 RARIF-PLLPQSP 247
+ P P P
Sbjct: 181 TPPVITPPTPTPP 193
>At2g33490.1 68415.m04105 hydroxyproline-rich glycoprotein family
protein Common family member:At3g26910 [Arabidopsis
thaliana]
Length = 623
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 458 PVASEPVLVVSVAAEPDSVVPPPVSTWHRTPDPRASGSGNFNAQTGY 598
PV+ P + S A P V P +S H P P S + + GY
Sbjct: 484 PVSKLPKVSSSPTASPTFVSTPKISELHELPRPPPRSSTKSSRELGY 530
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +2
Query: 110 PLTVSSPKAASPTRVTMVRTTVSLTPPTRTDTSPRARIFPLLPQSPRKS*NLWSRTPVMR 289
P T + P A+P T + PP T P A + P P +P+ + + TP +
Sbjct: 41 PTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPA-VTPTSPPAPKVAPVISPATPPPQ 99
Query: 290 P 292
P
Sbjct: 100 P 100
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 28.3 bits (60), Expect = 4.5
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 44 PLKASPTTSKPPTEFVLMRRE*PLTVSSPKAASPT-RVTMVRTTVSLTPPTRTDTSPRAR 220
P P + PPT V P SP +PT V VS PPT T + P +
Sbjct: 75 PAPVPPVSPPPPTPSVPS----PTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVP-SP 129
Query: 221 IFPLLPQSPRKS*NLWSRTPVMRP 292
P+ P P + ++ S TP + P
Sbjct: 130 TPPVSPPPPTPTPSVPSPTPPVSP 153
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 458 PVASEPVLVVSVAAEPDSVVPPPVSTWHRTPDPRASGSGNFN 583
P+ S P V S +P + +PP S P P +S SG +
Sbjct: 807 PIYSPPPPVFSPPPKPVTPLPPATSPMANAPTPSSSESGEIS 848
>At5g27660.1 68418.m03315 DegP protease, putative similar to Serine
protease HTRA2, mitochondrial precursor (High
temperature requirement protein A2) (HtrA2) (Omi
stress-regulated endoprotease) (Serine proteinase OMI)
(SP:O43464) {Homo sapiens}
Length = 459
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +2
Query: 119 VSSPKAASPTRVTMVRTTVSLTPPTRTDTSPRARIFPLLPQSPRKS*NL--WSRTP--VM 286
VSS K + R+ V T S T+ R R+ +P+S R+S +L W +P +
Sbjct: 39 VSSSKRSELIRIISVATATSGILYASTNPDARTRVSLAIPESVRESLSLLPWQISPGLIH 98
Query: 287 RPLVSL 304
RP SL
Sbjct: 99 RPEQSL 104
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +2
Query: 56 SPTTSKPPTEFVLMRRE*PLTVSSPKAASPTRVTMVRTTVSLTPPTRTDTSPRARIFPLL 235
+P +S PP+ + + S P A PT+ T T+ S +PP + SP+ P
Sbjct: 34 TPPSSPPPSSISAPPPDISASFSPPPAP-PTQETSPPTSPSSSPPVVANPSPQTPENP-S 91
Query: 236 PQSPRKS*NLWSRTPVMRP 292
P +P S + P P
Sbjct: 92 PPAPEGSTPVTPPAPPQTP 110
>At2g34080.1 68415.m04172 cysteine proteinase, putative contains
similarity to cysteine protease SPCP1 GI:13491750 from
[Ipomoea batatas]
Length = 345
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 61 YDFETSNGIRADAQG--VATNGVQSQGSFAYKGDDG 162
YD GI +DA V G+ S+ ++Y+G DG
Sbjct: 189 YDRGCDGGIMSDAFNYVVQNRGIASENDYSYQGSDG 224
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,220,639
Number of Sequences: 28952
Number of extensions: 222824
Number of successful extensions: 934
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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