Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0155
(371 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 128 1e-30
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 126 4e-30
08_02_0657 - 19749835-19751942,19753123-19753561 90 4e-19
06_01_0057 - 483710-484309 29 1.2
04_03_0502 - 16604289-16605374,16605546-16605716,16607044-16607337 28 2.7
11_04_0301 + 16142236-16142945,16143748-16144247,16144557-161446... 27 3.6
01_01_0308 + 2519384-2519726,2520350-2520663,2520931-2521110 27 3.6
06_01_0016 + 184804-185025,185121-185237,185324-185737,185827-18... 27 4.7
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 27 4.7
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 27 6.2
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 26 8.2
06_03_0607 - 22703662-22703786,22704402-22704618 26 8.2
05_05_0262 - 23666184-23666262,23666564-23667759 26 8.2
02_05_1019 - 33549576-33550247,33550885-33551121,33551206-335513... 26 8.2
01_06_0919 - 32993752-32993856,32994383-32994592,32994666-329952... 26 8.2
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 128 bits (310), Expect = 1e-30
Identities = 61/89 (68%), Positives = 72/89 (80%)
Frame = +3
Query: 57 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 236
AD K D STAIL RK PNRL+V+EA +DDNSVVAL ME+LQLFRGDTVLLKGK+
Sbjct: 11 ADPKGKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKK 70
Query: 237 RKETVCIVLSDDNCPDEKIRMNRVVRNNL 323
RK+T+CIVL+D+ C + KIRMN+VVR NL
Sbjct: 71 RKDTICIVLADETCEEPKIRMNKVVRKNL 99
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 126 bits (305), Expect = 4e-30
Identities = 58/89 (65%), Positives = 71/89 (79%)
Frame = +3
Query: 57 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 236
+D K D STAIL RK PNRL+V+EA +DDNSV+ + ME+LQLFRGDTVLLKGK+
Sbjct: 11 SDPKGKKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFRGDTVLLKGKK 70
Query: 237 RKETVCIVLSDDNCPDEKIRMNRVVRNNL 323
RK+T+CIVL+DD C + KIRMN+VVR NL
Sbjct: 71 RKDTICIVLADDTCEEPKIRMNKVVRKNL 99
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 90.2 bits (214), Expect = 4e-19
Identities = 45/87 (51%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
Frame = +3
Query: 78 DLSTAILR--RKDRPNRLIVEEA---VSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRK 242
D STAIL +K PNRL+ ++A V+ DNS V LS+A ME+L +FRGD V L+G+RR+
Sbjct: 16 DYSTAILECAKKKSPNRLMADDAEGGVAVDNSTVTLSEATMEELGIFRGDLVTLRGRRRR 75
Query: 243 ETVCIVLSDDNCPDEKIRMNRVVRNNL 323
E VC D++CPD ++R++R VR+NL
Sbjct: 76 EAVCYAQKDESCPDGRLRLSRGVRSNL 102
>06_01_0057 - 483710-484309
Length = 199
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 82 YRPRSSVARTDPTVSLSKKQSAMTTQS-WHFHRPKWSNFNSSVVTQSCSR 228
Y P ART P ++ + A S W F WS+ S V+T+ SR
Sbjct: 62 YFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSR 111
>04_03_0502 - 16604289-16605374,16605546-16605716,16607044-16607337
Length = 516
Score = 27.9 bits (59), Expect = 2.7
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 332 RTRKVVSHNTVHPNFLIRAIIV*EHDANGFLAAFA--LEQDCVTTEELK 192
+T++V+SH V PN L+R +I NG EQD VT E K
Sbjct: 175 QTQQVLSHTIVIPNHLVRTMISQWCTENGLTLPEIENQEQDHVTNSEEK 223
>11_04_0301 +
16142236-16142945,16143748-16144247,16144557-16144649,
16144879-16145005,16145265-16145468,16145587-16145692
Length = 579
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +1
Query: 193 FNSSVVTQSCSRANAARKPFA----SCSQTIIALMRKF 294
+NSS + SC+ A ++PF SC+ ++ L R+F
Sbjct: 475 YNSSRLLYSCTAREAEQQPFGCLTDSCTDSLTVLKRRF 512
>01_01_0308 + 2519384-2519726,2520350-2520663,2520931-2521110
Length = 278
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -1
Query: 359 GAMDTTSERRTRKVVSHNTVHPNFLIRAIIV*EHDANGFLAAFALEQ 219
GA RR RKV SH T P + HD N + ALE+
Sbjct: 159 GAPAANRRRRLRKVASHGTTPPKNVFSGAEDGGHDWNVAASVSALEK 205
>06_01_0016 +
184804-185025,185121-185237,185324-185737,185827-186888
Length = 604
Score = 27.1 bits (57), Expect = 4.7
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = -1
Query: 332 RTRKVVSHNTVHPNFLIRAIIV*EHDANG 246
+T++ +SH ++ PNF+++++I +ANG
Sbjct: 271 KTQQPLSHTSLTPNFVLKSLISQWCEANG 299
>02_03_0273 +
17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 48 NKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAK 182
+ MA + P +L AI DRP +EEA D +S+V ++++
Sbjct: 766 SSMALCRPPVELVQAISTVSDRPTISALEEAGDDGHSIVDAAESR 810
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 26.6 bits (56), Expect = 6.2
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 132 EEAVSDDNSVVALSQAKMEQL-QLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMN 302
EE +NS + + AK++ L Q GD++ + KRR +V L+ + D +N
Sbjct: 449 EEEFRRENSDIEMKDAKVDLLDQTLSGDSLRAR-KRRGASVLYALTSEELKDHLCTLN 505
>10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 163 WHFHRPKWSNFNSSVVTQSCSRANAARKPFASCSQTIIALM 285
W HR + +++++ QSC R AR F+ + AL+
Sbjct: 905 WRLHRTYQQSHSAALLIQSCIRGFIARHYFSVIKEQKAALV 945
>06_03_0607 - 22703662-22703786,22704402-22704618
Length = 113
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 261 ARCKRFPCGVCP*ARLCHHGRVEVAPFWPVKVPRLS 154
A FP + P R H RV++A F P +VP ++
Sbjct: 26 AHLSAFPSRLAP-PRCVPHDRVQLAAFRPTRVPAVA 60
>05_05_0262 - 23666184-23666262,23666564-23667759
Length = 424
Score = 26.2 bits (55), Expect = 8.2
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -3
Query: 267 LRARCKRFPCGVCP*--ARLCHHGRVEVAP 184
LR KR PC V AR+CH+ RV VAP
Sbjct: 13 LRLVHKRLPCLVDRRRMARVCHNWRVAVAP 42
>02_05_1019 -
33549576-33550247,33550885-33551121,33551206-33551317,
33551998-33552215,33553084-33553194
Length = 449
Score = 26.2 bits (55), Expect = 8.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = -2
Query: 367 KDTERWIPHQKDAHERLFLTTRFIRI--FSSGQLSSESTMQTV--SLRR 233
+DTE W+ H++ HE RFI+ ++ ++ ES +Q + LRR
Sbjct: 165 RDTEEWMRHRQLPHELRERVRRFIQYKWLATRGVNEESILQALPADLRR 213
>01_06_0919 - 32993752-32993856,32994383-32994592,32994666-32995220,
32995705-32995926,32996381-32996511,32997456-32998353,
32998453-32998530,32998612-32998683,32998728-32998763,
32999413-33000353,33000531-33000659,33000751-33000894,
33000994-33001060,33002434-33002502,33003144-33003278
Length = 1263
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 117 NRLIVEEAVSDDNSV-VALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 284
N+ I+E+ DD+ V+ + ++ LF T+ R + C LSDD+C D
Sbjct: 991 NQCILEQLTGDDSVCPVSNCRVRLNSTSLFSRGTLECALSR---STCEFLSDDSCED 1044
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,874,775
Number of Sequences: 37544
Number of extensions: 182501
Number of successful extensions: 510
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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