Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0155
(371 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 147 1e-35
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 147 1e-35
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 147 1e-35
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 147 1e-35
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 147 1e-35
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 55 8e-08
EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein. 28 8.4
BC063566-1|AAH63566.1| 837|Homo sapiens NLRC5 protein protein. 28 8.4
AK027416-1|BAB55098.1| 753|Homo sapiens protein ( Homo sapiens ... 28 8.4
AK027414-1|BAB55096.1| 753|Homo sapiens protein ( Homo sapiens ... 28 8.4
AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein. 28 8.4
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 147 bits (356), Expect = 1e-35
Identities = 70/89 (78%), Positives = 83/89 (93%)
Frame = +3
Query: 57 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 236
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 237 RKETVCIVLSDDNCPDEKIRMNRVVRNNL 323
R+E VCIVLSDD C DEKIRMNRVVRNNL
Sbjct: 64 RREAVCIVLSDDTCSDEKIRMNRVVRNNL 92
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 325 RVRLSDVVSIAPCP 366
RVRL DV+SI PCP
Sbjct: 93 RVRLGDVISIQPCP 106
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 147 bits (356), Expect = 1e-35
Identities = 70/89 (78%), Positives = 83/89 (93%)
Frame = +3
Query: 57 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 236
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 237 RKETVCIVLSDDNCPDEKIRMNRVVRNNL 323
R+E VCIVLSDD C DEKIRMNRVVRNNL
Sbjct: 64 RREAVCIVLSDDTCSDEKIRMNRVVRNNL 92
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 325 RVRLSDVVSIAPCP 366
RVRL DV+SI PCP
Sbjct: 93 RVRLGDVISIQPCP 106
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 147 bits (356), Expect = 1e-35
Identities = 70/89 (78%), Positives = 83/89 (93%)
Frame = +3
Query: 57 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 236
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 237 RKETVCIVLSDDNCPDEKIRMNRVVRNNL 323
R+E VCIVLSDD C DEKIRMNRVVRNNL
Sbjct: 64 RREAVCIVLSDDTCSDEKIRMNRVVRNNL 92
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 325 RVRLSDVVSIAPCP 366
RVRL DV+SI PCP
Sbjct: 93 RVRLGDVISIQPCP 106
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 147 bits (356), Expect = 1e-35
Identities = 70/89 (78%), Positives = 83/89 (93%)
Frame = +3
Query: 57 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 236
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 237 RKETVCIVLSDDNCPDEKIRMNRVVRNNL 323
R+E VCIVLSDD C DEKIRMNRVVRNNL
Sbjct: 64 RREAVCIVLSDDTCSDEKIRMNRVVRNNL 92
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 325 RVRLSDVVSIAPCP 366
RVRL DV+SI PCP
Sbjct: 93 RVRLGDVISIQPCP 106
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 147 bits (356), Expect = 1e-35
Identities = 70/89 (78%), Positives = 83/89 (93%)
Frame = +3
Query: 57 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 236
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 237 RKETVCIVLSDDNCPDEKIRMNRVVRNNL 323
R+E VCIVLSDD C DEKIRMNRVVRNNL
Sbjct: 64 RREAVCIVLSDDTCSDEKIRMNRVVRNNL 92
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 325 RVRLSDVVSIAPCP 366
RVRL DV+SI PCP
Sbjct: 93 RVRLGDVISIQPCP 106
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +3
Query: 240 KETVCIVLSDDNCPDEKIRMNRVVRNNL 323
+E VCIVLSDD C DEKIRMNRVVRNNL
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNL 30
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 325 RVRLSDVVSIAPCP 366
RVRL DV+SI PCP
Sbjct: 31 RVRLGDVISIQPCP 44
>EF452236-1|ABO40479.1| 1866|Homo sapiens NOD4 protein.
Length = 1866
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 242 LAAFALEQDCVTTEELKLLHFGL*KCH--D*VVIADCFFDNETVGSVLATEDRGR*IIRA 69
L F L CV+TE L L GL CH + + +++ FD E +++ + G+ +++
Sbjct: 1496 LKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALE-GKWMLKR 1554
Query: 68 FIICHFIQN 42
+ H + N
Sbjct: 1555 LDLSHLLLN 1563
>BC063566-1|AAH63566.1| 837|Homo sapiens NLRC5 protein protein.
Length = 837
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 242 LAAFALEQDCVTTEELKLLHFGL*KCH--D*VVIADCFFDNETVGSVLATEDRGR*IIRA 69
L F L CV+TE L L GL CH + + +++ FD E +++ + G+ +++
Sbjct: 467 LKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALE-GKWMLKR 525
Query: 68 FIICHFIQN 42
+ H + N
Sbjct: 526 LDLSHLLLN 534
>AK027416-1|BAB55098.1| 753|Homo sapiens protein ( Homo sapiens
cDNA FLJ14510 fis, clone NT2RM1000623, weakly similar to
RIBONUCLEASE INHIBITOR. ).
Length = 753
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 242 LAAFALEQDCVTTEELKLLHFGL*KCH--D*VVIADCFFDNETVGSVLATEDRGR*IIRA 69
L F L CV+TE L L GL CH + + +++ FD E +++ + G+ +++
Sbjct: 383 LKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALE-GKWMLKR 441
Query: 68 FIICHFIQN 42
+ H + N
Sbjct: 442 LDLSHLLLN 450
>AK027414-1|BAB55096.1| 753|Homo sapiens protein ( Homo sapiens
cDNA FLJ14508 fis, clone NT2RM1000421, weakly similar to
RIBONUCLEASE INHIBITOR. ).
Length = 753
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 242 LAAFALEQDCVTTEELKLLHFGL*KCH--D*VVIADCFFDNETVGSVLATEDRGR*IIRA 69
L F L CV+TE L L GL CH + + +++ FD E +++ + G+ +++
Sbjct: 383 LKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALE-GKWMLKR 441
Query: 68 FIICHFIQN 42
+ H + N
Sbjct: 442 LDLSHLLLN 450
>AF389420-1|AAO59377.1| 1866|Homo sapiens NOD27 protein.
Length = 1866
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 242 LAAFALEQDCVTTEELKLLHFGL*KCH--D*VVIADCFFDNETVGSVLATEDRGR*IIRA 69
L F L CV+TE L L GL CH + + +++ FD E +++ + G+ +++
Sbjct: 1496 LKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQFDEEGTKALMRALE-GKWMLKR 1554
Query: 68 FIICHFIQN 42
+ H + N
Sbjct: 1555 LDLSHLLLN 1563
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,588,336
Number of Sequences: 237096
Number of extensions: 936169
Number of successful extensions: 2143
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2143
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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