Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0155
         (371 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic ...   159   8e-40
AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM0288...   159   8e-40
AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional...   159   8e-40
AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,...   159   8e-40
BT024189-1|ABC86251.1|  442|Drosophila melanogaster RH55216p pro...    32   0.28 
AE014296-111|AAF47394.1|  442|Drosophila melanogaster CG17181-PA...    32   0.28 
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    27   7.9  

>AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic
           reticulum membranefusion protein protein.
          Length = 799

 Score =  159 bits (387), Expect = 8e-40
 Identities = 77/90 (85%), Positives = 86/90 (95%)
 Frame = +3

Query: 54  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 233
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 234 RRKETVCIVLSDDNCPDEKIRMNRVVRNNL 323
           RRKETVCIVLSDD CPDEKIRMNRVVRNNL
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNL 89


>AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM02885
           protein.
          Length = 801

 Score =  159 bits (387), Expect = 8e-40
 Identities = 77/90 (85%), Positives = 86/90 (95%)
 Frame = +3

Query: 54  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 233
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 234 RRKETVCIVLSDDNCPDEKIRMNRVVRNNL 323
           RRKETVCIVLSDD CPDEKIRMNRVVRNNL
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNL 89


>AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional
           endoplasmic reticulumATPase TER94 protein.
          Length = 801

 Score =  159 bits (387), Expect = 8e-40
 Identities = 77/90 (85%), Positives = 86/90 (95%)
 Frame = +3

Query: 54  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 233
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 234 RRKETVCIVLSDDNCPDEKIRMNRVVRNNL 323
           RRKETVCIVLSDD CPDEKIRMNRVVRNNL
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNL 89


>AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,
           isoform A protein.
          Length = 801

 Score =  159 bits (387), Expect = 8e-40
 Identities = 77/90 (85%), Positives = 86/90 (95%)
 Frame = +3

Query: 54  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 233
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 234 RRKETVCIVLSDDNCPDEKIRMNRVVRNNL 323
           RRKETVCIVLSDD CPDEKIRMNRVVRNNL
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNL 89


>BT024189-1|ABC86251.1|  442|Drosophila melanogaster RH55216p
           protein.
          Length = 442

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = -3

Query: 345 HIRKTHTKGCFSQHGSSEFSH----QGNYRLRARCKRFPCGVC 229
           H+R TH +GC  Q     FS     QG+ R     K F CGVC
Sbjct: 168 HVR-THNQGCECQFCGKRFSRPWLLQGHIRTHTGEKPFKCGVC 209


>AE014296-111|AAF47394.1|  442|Drosophila melanogaster CG17181-PA
           protein.
          Length = 442

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = -3

Query: 345 HIRKTHTKGCFSQHGSSEFSH----QGNYRLRARCKRFPCGVC 229
           H+R TH +GC  Q     FS     QG+ R     K F CGVC
Sbjct: 168 HVR-THNQGCECQFCGKRFSRPWLLQGHIRTHTGEKPFKCGVC 209


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
 Frame = -3

Query: 321   GCFSQHGSSEFSHQGNYRLRARCKRFPC-GVCP*ARLCH---HGRVEVAPFWPVKVPRLS 154
             GC  +  S+       Y L  RC R PC G C    +CH   HG + V P      P L+
Sbjct: 19879 GCRPECTSNSDCPLDKYCLNLRC-RDPCPGACGIRAICHVQNHGPLCVCPPHLTGNPLLA 19937

Query: 153   C 151
             C
Sbjct: 19938 C 19938


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,464,722
Number of Sequences: 53049
Number of extensions: 307097
Number of successful extensions: 904
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)