Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0155
(371 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 129 5e-31
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 126 5e-30
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 126 5e-30
AF047661-6|AAC04438.2| 577|Caenorhabditis elegans Hypothetical ... 30 0.61
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 29 0.80
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 29 0.80
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 1.4
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 2.4
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 2.4
Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical p... 27 4.3
AL033510-9|CAL49451.1| 291|Caenorhabditis elegans Hypothetical ... 26 7.5
AL033510-8|CAA22061.1| 291|Caenorhabditis elegans Hypothetical ... 26 7.5
Z82280-6|CAB05267.2| 460|Caenorhabditis elegans Hypothetical pr... 26 9.9
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 129 bits (312), Expect = 5e-31
Identities = 58/86 (67%), Positives = 77/86 (89%)
Frame = +3
Query: 66 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 245
K D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72
Query: 246 TVCIVLSDDNCPDEKIRMNRVVRNNL 323
+V I++SD++CP+EK+RMNRVVRNNL
Sbjct: 73 SVAIIVSDESCPNEKVRMNRVVRNNL 98
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 325 RVRLSDVVSIAPCPS 369
R+RL DVVSI P P+
Sbjct: 99 RIRLGDVVSITPAPN 113
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 126 bits (304), Expect = 5e-30
Identities = 57/86 (66%), Positives = 77/86 (89%)
Frame = +3
Query: 66 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 245
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 246 TVCIVLSDDNCPDEKIRMNRVVRNNL 323
TV IVL+ DNCP++KI+MN+VVRNNL
Sbjct: 73 TVSIVLNADNCPNDKIKMNKVVRNNL 98
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 126 bits (304), Expect = 5e-30
Identities = 57/86 (66%), Positives = 77/86 (89%)
Frame = +3
Query: 66 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 245
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Query: 246 TVCIVLSDDNCPDEKIRMNRVVRNNL 323
TV IVL+ DNCP++KI+MN+VVRNNL
Sbjct: 73 TVSIVLNADNCPNDKIKMNKVVRNNL 98
>AF047661-6|AAC04438.2| 577|Caenorhabditis elegans Hypothetical
protein M70.5 protein.
Length = 577
Score = 29.9 bits (64), Expect = 0.61
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 138 AVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIV-LSDDNCPDEKIRMNRVV 311
AVSD+ V LS + GDTV++ +++TV ++ L D D KI + RV+
Sbjct: 397 AVSDETFV--LSGTSLPSFIATSGDTVVITDLGKQQTVILIRLDDSKWKDVKIEIIRVI 453
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
protein C10C6.1 protein.
Length = 1565
Score = 29.5 bits (63), Expect = 0.80
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 55 WQIIKALMIYRPRSSVARTDPTVSLSKKQSAMT-TQSWHFHRPKWSNFNSSVVTQSCSRA 231
W + R RSS+ +DP +S S S T T S H + SS T S +R
Sbjct: 56 WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANR- 114
Query: 232 NAARKPFASCSQTIIALMR 288
+ A +P S + + L R
Sbjct: 115 SPANRPSLHSSTSPVTLQR 133
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 29.5 bits (63), Expect = 0.80
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 55 WQIIKALMIYRPRSSVARTDPTVSLSKKQSAMT-TQSWHFHRPKWSNFNSSVVTQSCSRA 231
W + R RSS+ +DP +S S S T T S H + SS T S +R
Sbjct: 56 WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANR- 114
Query: 232 NAARKPFASCSQTIIALMR 288
+ A +P S + + L R
Sbjct: 115 SPANRPSLHSSTSPVTLQR 133
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 80 IIRAFIICHFIQNLLLESKNYYNFY 6
++ AF++C + N+LL SK+ Y FY
Sbjct: 8 LLLAFVVCLTLFNVLLWSKSNYGFY 32
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 45 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 194
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 45 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 194
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>Z70783-11|CAA94860.2| 782|Caenorhabditis elegans Hypothetical
protein ZK856.12 protein.
Length = 782
Score = 27.1 bits (57), Expect = 4.3
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 135 EAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDD---NCPD 284
+++SDD A + + ++ G + K K K CI+LS+D N PD
Sbjct: 120 KSLSDDMERAAATFRNPHESEIVPGAMYIFKQKHGKAYRCIILSEDGDMNIPD 172
>AL033510-9|CAL49451.1| 291|Caenorhabditis elegans Hypothetical
protein Y40H7A.4b protein.
Length = 291
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 48 NKMADNKSP-DDLSTAILRRKDRPNRLIVEEAVSDDN 155
+++ D+ SP +L A L D+ R I+E AV +DN
Sbjct: 49 HQLLDSDSPIRELRRAALLSADQVQREIIENAVGEDN 85
>AL033510-8|CAA22061.1| 291|Caenorhabditis elegans Hypothetical
protein Y40H7A.4a protein.
Length = 291
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 48 NKMADNKSP-DDLSTAILRRKDRPNRLIVEEAVSDDN 155
+++ D+ SP +L A L D+ R I+E AV +DN
Sbjct: 49 HQLLDSDSPIRELRRAALLSADQVQREIIENAVGEDN 85
>Z82280-6|CAB05267.2| 460|Caenorhabditis elegans Hypothetical
protein R05A10.6 protein.
Length = 460
Score = 25.8 bits (54), Expect = 9.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 321 GCFSQHGSSEFSHQGNYRLRARC 253
GCF HG +FS +Y +C
Sbjct: 19 GCFILHGGLDFSKSSSYSSNQQC 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,491,280
Number of Sequences: 27780
Number of extensions: 157858
Number of successful extensions: 435
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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