Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0153
(747 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g57490.1 68418.m07184 porin, putative similar to 36kDA porin ... 62 3e-10
At3g01280.1 68416.m00035 porin, putative similar to SP|P42055 34... 62 4e-10
At5g67500.1 68418.m08512 porin, putative similar to SP|P42055 34... 53 2e-07
At5g37610.1 68418.m04530 hypothetical protein 33 0.20
At3g49920.1 68416.m05458 porin, putative similar to SP|P42055 34... 32 0.46
At2g36340.1 68415.m04460 DNA-binding storekeeper protein-related... 29 2.5
At3g13610.1 68416.m01713 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 3.3
At4g30810.1 68417.m04365 serine carboxypeptidase S10 family prot... 28 7.6
At3g19840.1 68416.m02513 FF domain-containing protein / WW domai... 28 7.6
At4g25920.1 68417.m03727 expressed protein contains Pfam profile... 27 10.0
At3g17365.1 68416.m02219 expressed protein low similarity to PIR... 27 10.0
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 27 10.0
At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein ... 27 10.0
>At5g57490.1 68418.m07184 porin, putative similar to 36kDA porin II
[Solanum tuberosum] GI:515360; contains Pfam profile
PF01459: Eukaryotic porin
Length = 274
Score = 62.5 bits (145), Expect = 3e-10
Identities = 49/207 (23%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Frame = +3
Query: 81 APPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKF 260
+P +AD+GKKA D+ +K Y F K L S +G EF + T ++ FG +S+ +
Sbjct: 4 SPAPFADIGKKAKDLLNKDYIFD-HKFTLTMLSATGTEFVA--TGLKKDDFFFGDISTLY 60
Query: 261 AVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDT 440
K K ++ ++++T +T+++ + + K + K+GKL + +
Sbjct: 61 --KGQNTIVDLKIDSHSSVSTKVTLKNLLPSA-KAVISFKIPDH---KSGKLDVQYVHPH 114
Query: 441 VAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQS-GDFALH 617
+N+++ L+ P++D++A + Q G FDT + +K N +G+ + G A
Sbjct: 115 ATLNSSIGLN-PTPLLDLSATIGSQNVCLGGEVSFDTASSSLTKYNAGIGFNNQGVSAAL 173
Query: 618 TNVDNGKDFGGSIYQKVSDKLDCGVSM 698
D G+ + V+ G +
Sbjct: 174 ILEDKGESLRATYVHTVNPTTSFGAEL 200
>At3g01280.1 68416.m00035 porin, putative similar to SP|P42055 34
kDa outer mitochondrial membrane protein porin
(Voltage-dependent anion-selective channel protein)
(VDAC) {Solanum tuberosum}; contains Pfam profile
PF01459: Eukaryotic porin
Length = 276
Score = 62.1 bits (144), Expect = 4e-10
Identities = 50/199 (25%), Positives = 87/199 (43%)
Frame = +3
Query: 84 PPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKFA 263
P Y ++GKKA D+ K H K + T S +GV TS T ++ + G ++ F
Sbjct: 5 PGLYTEIGKKARDLLYKD-HNSDQKFSITTFSPAGVAITS--TGTKKGDLLLGDVA--FQ 59
Query: 264 VKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTV 443
+ +T K TD+T T+ D+ A GL+ Q +GK++ + ++
Sbjct: 60 SRRKNITTDLKVCTDSTFLITATV-DEAAPGLRSIFSFKVPDQN---SGKVELQYLHEYA 115
Query: 444 AVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTN 623
++T++ L P V+ + V+ G FDT+ F+K N L + D
Sbjct: 116 GISTSMGLT-QNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLT 174
Query: 624 VDNGKDFGGSIYQKVSDKL 680
V++ D + Y + + L
Sbjct: 175 VNDKGDLLNASYYHIVNPL 193
>At5g67500.1 68418.m08512 porin, putative similar to SP|P42055 34
kDa outer mitochondrial membrane protein porin
(Voltage-dependent anion-selective channel protein)
(VDAC) {Solanum tuberosum}; contains Pfam profile
PF01459: Eukaryotic porin
Length = 276
Score = 52.8 bits (121), Expect = 2e-07
Identities = 45/177 (25%), Positives = 79/177 (44%)
Frame = +3
Query: 84 PPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKFA 263
P + D+GKKA D+ ++ Y+ K + T S SGV TS T+ ++ G +++++
Sbjct: 5 PGLFTDIGKKAKDLLTRDYNSDQ-KFSISTYSASGVALTS--TALKKGGVHAADVATQYK 61
Query: 264 VKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTV 443
K+ F K +TD+++ T +T+ + I K + P + KL+ + +D
Sbjct: 62 YKN--ALFDVKIDTDSSVLTTVTLTE-ILPSTK-AIASFKVPD--YNSAKLEVQYFHDHA 115
Query: 444 AVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFAL 614
V L P++D+ A L G +DT F+K N + D L
Sbjct: 116 TVTAAAALK-QNPLIDITATLGSPVISFGAEAGYDTTSKTFTKYNAGISVTKPDACL 171
>At5g37610.1 68418.m04530 hypothetical protein
Length = 163
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = +3
Query: 474 AGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKD-FGG 650
A P++ +AV W G D +K N L + D ++D F
Sbjct: 16 ANPILSFSAVFGNDFWRFGFELTLDLVNRIITKANTVLSLITEDTTTTFSIDKKASLFTA 75
Query: 651 SIYQKVSDKLDCGVSMKW 704
S YQ++ K CG K+
Sbjct: 76 SYYQRLHSKTVCGAEAKY 93
>At3g49920.1 68416.m05458 porin, putative similar to SP|P42055 34
kDa outer mitochondrial membrane protein porin
(Voltage-dependent anion-selective channel protein)
(VDAC) {Solanum tuberosum}; contains Pfam profile
PF01459: Eukaryotic porin
Length = 226
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 84 PPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSN 218
P +AD+GK A D+ ++ Y K + T S SGV TS N
Sbjct: 5 PGLFADIGKYAKDLLTRDYSTDQ-KFSISTNSVSGVALTSTALKN 48
>At2g36340.1 68415.m04460 DNA-binding storekeeper protein-related
contains similarity to storekeeper protein [Solanum
tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
Protein of unknown function, DUF573
Length = 414
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 300 NTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTVAVNTNLDLDLAG 479
N+D+TL + ++ + + L T T T+T L S + + + N +L + G
Sbjct: 14 NSDDTLTRNREVEVEAMLSRRKQLRTTTTRTTTTRTTPLSLSSSASKMNWSKNDELVILG 73
Query: 480 PVVDV--AAVLNYQG-WLAGVHTQFDTQKAKFSK 572
+VD L+Y+ W A D +AKFSK
Sbjct: 74 GIVDYENETKLSYRSDWDALYRYIKDCVEAKFSK 107
>At3g13610.1 68416.m01713 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to desacetoxyvindoline
4-hydroxylase [Catharanthus roseus][GI:1916643],
flavonol synthase 1 [SP|Q96330]; contains PF03171
2OG-Fe(II) oxygenase superfamily domain
Length = 361
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 355 PAAILSWIVMSVANVLSVFHFSVKVKP*SFTANLEERLPKTFPLSWLEVIPLVN-STPD 182
PA + ++V V + +K P + LEERL F E IP+++ S PD
Sbjct: 13 PAEVTDFVVYKGNGVKGLSETGIKALPEQYIQPLEERLINKFVNETDEAIPVIDMSNPD 71
>At4g30810.1 68417.m04365 serine carboxypeptidase S10 family protein
similar to serine-type carboxypeptidase (SP:P55748)
[Hordeum vulgare]
Length = 479
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 284 SQAIVFHCKFGGKAAKNLSAFLVGGDSAGEFNTRLAL 174
S+AIV H + K + NL ++VG +F+ RL L
Sbjct: 196 SEAIVKHNQGSDKNSINLKGYMVGNGLMDDFHDRLGL 232
>At3g19840.1 68416.m02513 FF domain-containing protein / WW
domain-containing protein weak similarity to
transcription factor CA150b [Mus musculus] GI:6329166;
contains Pfam profiles PF01846: FF domain, PF00397: WW
domain
Length = 743
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 72 TDMAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKS--ESGVEFTSGITSNQESGK 233
T ++ P ++ G+ A + K +FG LDL K +SG+ +S ITS SGK
Sbjct: 268 TSLSAPAISNGGRDAASL--KTTNFGSSALDLVKKKLHDSGMPVSSTITSEANSGK 321
>At4g25920.1 68417.m03727 expressed protein contains Pfam profile
PF03478: Protein of unknown function (DUF295)
Length = 390
Score = 27.5 bits (58), Expect = 10.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 87 PYYADLGKKANDVFSKGYHFGVFKLDLKT 173
P + G K N ++ GY+FGV+ L KT
Sbjct: 330 PASSSPGLKPNCIYFVGYNFGVYDLTTKT 358
>At3g17365.1 68416.m02219 expressed protein low similarity to
PIR|I46078 endothelin converting enzyme from Bos
primigenius taurus
Length = 239
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 615 GEQSHQIGNLEQSCSWRTLLFVYQTGCVHQPANPGSLVLLQRLQLD 478
G +++ ++SCSW T L V QP + L + L LD
Sbjct: 159 GAPIYRLRLFKESCSWTTKLHVIDKSLTDQPLDTPKWELTKPLPLD 204
>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 578
Score = 27.5 bits (58), Expect = 10.0
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 412 FPVLVPVCGAKVPSRVTLRPAAILSWIVMS-VANVLSVFHFSVKVKP*SFTANLE 251
FP+ V A +P T PA + W+V+S + VL + + + + +F A +E
Sbjct: 431 FPLKRAVADALLPHLETATPAELCQWLVLSDMYGVLKIREYCLDLVACNFEAFVE 485
>At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein
(ZFP6) identical to zinc finger protein, ZFP6
gi|790683|gb|AAA87302; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 197
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 745 APNSEIMCRPNPAVHFMLTPQSSLS 671
AP ++ +P+P H ML+P SS S
Sbjct: 99 APLPHLLSQPHPPPHMMLSPSSSSS 123
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,303,376
Number of Sequences: 28952
Number of extensions: 345759
Number of successful extensions: 950
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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