Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0152
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81056-9|CAB02908.2|  292|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z78412-1|CAB01655.1|  490|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z70034-9|CAA93849.1|  159|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AF106577-16|AAC78188.1|  369|Caenorhabditis elegans Hypothetical...    27   9.8  

>Z81056-9|CAB02908.2|  292|Caenorhabditis elegans Hypothetical
           protein F09F3.11 protein.
          Length = 292

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = +1

Query: 376 IVLYIFILIREAKICADGGV*NFLHLYRI*GRSVNANIFQKLCINNTLDQLKKHYTHVPR 555
           ++ ++  ++    I A G   N     +   ++  A+ F KLC+  T+      Y ++PR
Sbjct: 3   VIFHVIAVVSMFTISAMGLAVNTYLFQKFSNKAGRASAFHKLCLVKTIPNAIPDYENIPR 62

Query: 556 I 558
           I
Sbjct: 63  I 63


>Z78412-1|CAB01655.1|  490|Caenorhabditis elegans Hypothetical
           protein M176.2 protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 358 FTRLIHFMYYNFSFVIDIIKKI 293
           F  L HF+ Y F F+IDI K +
Sbjct: 80  FASLYHFIAYEFDFLIDIHKNV 101


>Z70034-9|CAA93849.1|  159|Caenorhabditis elegans Hypothetical
           protein C18E9.9 protein.
          Length = 159

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 12  YFFYSIYYHVSF*YAFISFIRILLV 86
           Y+F +I+YH +F +   + + +LLV
Sbjct: 91  YYFCNIFYHFNFWFLLATIVSVLLV 115


>AF106577-16|AAC78188.1|  369|Caenorhabditis elegans Hypothetical
           protein F46F5.10 protein.
          Length = 369

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 609 NKKSLTINKEYTCVCVSN 556
           NKKS TI  E +C CVSN
Sbjct: 46  NKKSRTIRIESSCECVSN 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,433,290
Number of Sequences: 27780
Number of extensions: 212183
Number of successful extensions: 397
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)