Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0151
         (492 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9XY92 Cluster: Spermidine synthase; n=14; Eukaryota|Re...    35   0.86 
UniRef50_Q8TB69 Cluster: Zinc finger protein 519; n=5; Homo/Pan/...    32   6.0  

>UniRef50_Q9XY92 Cluster: Spermidine synthase; n=14; Eukaryota|Rep:
           Spermidine synthase - Dictyostelium discoideum (Slime
           mold)
          Length = 284

 Score = 35.1 bits (77), Expect = 0.86
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 329 MDKLKTNWFTESCDMWPGGYFLIPSQRSTAPEKS 430
           MDK++  WF+E  + WPG  F +  ++    EKS
Sbjct: 1   MDKIQNGWFSEISEFWPGNSFSLEVEKVLHHEKS 34


>UniRef50_Q8TB69 Cluster: Zinc finger protein 519; n=5;
           Homo/Pan/Gorilla group|Rep: Zinc finger protein 519 -
           Homo sapiens (Human)
          Length = 540

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -1

Query: 225 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 112
           CIP +KY++ F  S   N  ++ F NHD  + ++ S H
Sbjct: 139 CIPMNKYQHKFLKSVFCNKNQINF-NHDSDISKHHSTH 175


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,704,526
Number of Sequences: 1657284
Number of extensions: 9635965
Number of successful extensions: 20052
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20051
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)