Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0151
         (492 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.0  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 300 LVLIIKARKRWTN*KPTGLRNHAICGLGGTFSFQVKEV 413
           LVLI+K R++  +   T L + AI  L  TF     E+
Sbjct: 74  LVLIVKRRRKTPSRINTMLMHLAIADLLVTFLMMPLEI 111


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 300 LVLIIKARKRWTN*KPTGLRNHAICGLGGTFSFQVKEV 413
           LVLI+K R++  +   T L + AI  L  TF     E+
Sbjct: 74  LVLIVKRRRKTPSRINTMLMHLAIADLLVTFLMMPLEI 111


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 175 QHY*THISQSRYICP 131
           +H  TH  + R+ CP
Sbjct: 364 RHLRTHTGEKRFACP 378


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,673
Number of Sequences: 336
Number of extensions: 2603
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)