Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0151
         (492 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278...    30   1.2  
01_06_1664 - 38984545-38984615,38984706-38984802,38985362-389855...    27   6.2  
01_02_0091 - 11023912-11024017,11024112-11024185,11024478-110248...    27   6.2  
01_01_0336 + 2712412-2712576,2713663-2713738,2713840-2713898,271...    27   6.2  

>10_07_0176 -
           13826764-13827064,13827271-13827377,13827474-13827836,
           13827912-13828079,13828153-13828374,13828784-13829023,
           13829640-13829719,13829853-13830018,13830720-13830783,
           13830861-13830962,13831085-13831227,13831370-13831474,
           13831551-13831706,13832125-13832241,13832315-13832392,
           13832466-13832550,13833334-13833455,13833546-13833611,
           13835190-13835284,13835427-13835523,13835873-13835983,
           13836083-13836164,13836292-13836353,13836620-13836685,
           13838002-13838232
          Length = 1142

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = -2

Query: 206 IKTRFALLTNSTLLNSHFTITIYMSKDMIRYI*QTETLDNDL 81
           + T   + T  TL ++   I++Y+S +MI++I  T+ ++NDL
Sbjct: 339 VVTILTMFTLITLYSTIIPISLYVSIEMIKFIQCTQFINNDL 380


>01_06_1664 -
           38984545-38984615,38984706-38984802,38985362-38985523,
           38985736-38985825,38986125-38986226,38986373-38986446,
           38986587-38986615,38986766-38986989
          Length = 282

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 406 KKYCPRKIKYPNFPVLIH 459
           KKYCPR I  P +  ++H
Sbjct: 244 KKYCPRYITLPTYDPIVH 261


>01_02_0091 -
           11023912-11024017,11024112-11024185,11024478-11024834,
           11024938-11025166,11025468-11025559,11026099-11026326,
           11027108-11027356,11027429-11027471,11027589-11027836,
           11027922-11028035,11028122-11028322,11028417-11028593,
           11028725-11028853,11029210-11029287,11029369-11029464,
           11029563-11029634,11031549-11031677,11032105-11032220,
           11033048-11033204,11033343-11033426,11033513-11033574,
           11034901-11035067,11035162-11035226,11035315-11035371,
           11035547-11035633,11036638-11036703,11036810-11036908
          Length = 1193

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 351 GLRNHAICGLGGTFSF 398
           G RN++I G GGTFSF
Sbjct: 878 GYRNNSISGSGGTFSF 893


>01_01_0336 +
           2712412-2712576,2713663-2713738,2713840-2713898,
           2714009-2714148,2714690-2714745,2714832-2714908,
           2715007-2715075
          Length = 213

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 329 MDKLKTNWFTESCDMWPGGYFLIPSQRS 412
           MDK K   +  SC  + GG+ L+P   S
Sbjct: 178 MDKEKAKQYILSCQSYDGGFGLVPGSES 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,629,361
Number of Sequences: 37544
Number of extensions: 244511
Number of successful extensions: 477
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)