Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0151
         (492 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB209417-1|BAD92654.1|  503|Homo sapiens zinc finger protein 519...    33   0.71 
BC024227-1|AAH24227.1|  540|Homo sapiens zinc finger protein 519...    32   0.94 
AF103212-1|AAD30772.1|  108|Homo sapiens immunoglobulin heavy ch...    30   3.8  

>AB209417-1|BAD92654.1|  503|Homo sapiens zinc finger protein 519
           variant protein.
          Length = 503

 Score = 32.7 bits (71), Expect = 0.71
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -1

Query: 225 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 112
           CIP +KY++ F  S   N  ++ F NHD  + ++ S H
Sbjct: 102 CIPMNKYQHKFLKSVFCNKNQINF-NHDSNISKHHSTH 138


>BC024227-1|AAH24227.1|  540|Homo sapiens zinc finger protein 519
           protein.
          Length = 540

 Score = 32.3 bits (70), Expect = 0.94
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -1

Query: 225 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 112
           CIP +KY++ F  S   N  ++ F NHD  + ++ S H
Sbjct: 139 CIPMNKYQHKFLKSVFCNKNQINF-NHDSDISKHHSTH 175


>AF103212-1|AAD30772.1|  108|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 108

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 370 YVAWGVLSHSKSKKY-CPRKIKYPNFPVLIHPFGEG-LVLAGS 492
           Y+ WG L  S S  Y C R+I    +P    P+G+G LV+  S
Sbjct: 57  YLQWGSLKASDSAMYYCVRQISSGFYPEWFDPWGQGTLVIVSS 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,857,776
Number of Sequences: 237096
Number of extensions: 1390231
Number of successful extensions: 2290
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2290
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)