Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0149
         (535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.0  

>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -2

Query: 444 SPPDVKWLLEPIDIYNVNAATHFENEF*GLSIVTMAAPPFKPKR 313
           +P DV+ +L        +   HF + + G  ++T A P ++ +R
Sbjct: 84  NPEDVELVLTDTKQNTKSFIYHFLHSWLGTGLLTSAGPKWQNRR 127


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 67  RCVFEILRYYYIHDFIIEK 11
           RCV E+LR Y    FI  K
Sbjct: 366 RCVKEVLRLYPSVHFISRK 384


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 67  RCVFEILRYYYIHDFIIEK 11
           RCV E+LR Y    FI  K
Sbjct: 366 RCVKEVLRLYPSVHFISRK 384


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 430  NIRWAVNPSNHLSNXXXXXXNSRG 501
            +I   ++PS H+S       +SRG
Sbjct: 1150 HIEKTIDPSGHISRRRSMSASSRG 1173


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 430  NIRWAVNPSNHLSNXXXXXXNSRG 501
            +I   ++PS H+S       +SRG
Sbjct: 1150 HIEKTIDPSGHISRRRSMSASSRG 1173


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 430  NIRWAVNPSNHLSNXXXXXXNSRG 501
            +I   ++PS H+S       +SRG
Sbjct: 1150 HIEKTIDPSGHISRRRSMSASSRG 1173


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 430  NIRWAVNPSNHLSNXXXXXXNSRG 501
            +I   ++PS H+S       +SRG
Sbjct: 1150 HIEKTIDPSGHISRRRSMSASSRG 1173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,814
Number of Sequences: 336
Number of extensions: 2073
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)