Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0147
         (789 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0101 - 766382-767487,767599-767756,767900-768615                 35   0.064
07_03_0902 - 22435692-22436156,22436684-22436923,22437228-224373...    29   5.6  
01_07_0106 - 41107673-41107942,41108362-41108574,41108877-411090...    29   5.6  
01_05_0553 + 23185473-23186188,23187096-23187101,23187230-231873...    28   7.4  

>01_01_0101 - 766382-767487,767599-767756,767900-768615
          Length = 659

 Score = 35.1 bits (77), Expect = 0.064
 Identities = 14/63 (22%), Positives = 35/63 (55%)
 Frame = +2

Query: 20  KNNSADIALYDHSIYSCIIPLDNSINRILMNTYIIICSVVIHIYFNVYICNYISVQICMY 199
           K   A+IA+ D   +SC +  D S N ++  TY+++ + ++ + +   +C ++   + ++
Sbjct: 246 KERIANIAIIDFYFWSCFLLGDRSHNNLIY-TYMVVDTALLILKWTAVLCRFVLAPLAVF 304

Query: 200 WFM 208
            F+
Sbjct: 305 IFL 307


>07_03_0902 -
           22435692-22436156,22436684-22436923,22437228-22437349,
           22437441-22437587,22437753-22437882,22437981-22438116,
           22438223-22438428,22438644-22438844,22438999-22439157,
           22439781-22439858,22440453-22440542,22440625-22440777,
           22440873-22440991,22441190-22441328,22441422-22441525,
           22441944-22441989,22442087-22442252,22442356-22442383,
           22442460-22442610,22442686-22442829,22442912-22443013,
           22443566-22444093
          Length = 1217

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/59 (23%), Positives = 29/59 (49%)
 Frame = -1

Query: 786 WFIPVNQLPSGHPTK*CKAQKPICSHNIQTTSAHYVKCTGMHGNAKPLIDMCNLISHRM 610
           W   V+       TK  KAQ       ++ T+ H+++C   +   +P++   +L+SH++
Sbjct: 720 WHSAVDSQKQSVVTK-FKAQLFKLMQQLENTTPHFIRCIQPNSKQRPMLFEHDLVSHQL 777


>01_07_0106 -
           41107673-41107942,41108362-41108574,41108877-41109041,
           41109431-41109649,41110205-41110324,41110427-41110489,
           41111034-41111606,41111691-41111858,41112414-41112495,
           41112667-41112743,41113031-41113101,41114315-41114363
          Length = 689

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -1

Query: 552 NLIGLGNKYFGSKLVITLYSTKQLGQILARSQNCISLRSGALMAYLKGIYVD 397
           +L+   N+Y   K  I +  T   G +  R +NCI   +     +LKGI  D
Sbjct: 28  HLVNKSNEYVAFKNYIVMLDTYLYGNLTRRLENCI-FNARLKQHHLKGIVFD 78


>01_05_0553 + 23185473-23186188,23187096-23187101,23187230-23187374,
            23187887-23188159,23188275-23188338,23188479-23188744,
            23188951-23189045,23189544-23189718,23190669-23191063,
            23191830-23191953,23192864-23192959,23193049-23193120,
            23194687-23194824,23195369-23195549,23195602-23195963,
            23196944-23197386,23197461-23197763,23197857-23198081,
            23198260-23198350,23198702-23198779,23198939-23199229,
            23199316-23199513,23199681-23200163,23200488-23200562,
            23201163-23201324,23201400-23201729,23201816-23201916,
            23202477-23202581,23202931-23203162,23203913-23204257,
            23204346-23204447,23206010-23206153,23206463-23206551,
            23206979-23207061,23207172-23207287,23207824-23207909,
            23208461-23208560,23209270-23209335
          Length = 2451

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 735  KAQKPICSHNIQTTSAHYVKCTGMHGNAKPLIDMC 631
            K+   I S +       YV    +H NA P++DMC
Sbjct: 2409 KSAFQIASRSGSVADVQYVAHQALHANALPVLDMC 2443


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,925,013
Number of Sequences: 37544
Number of extensions: 365056
Number of successful extensions: 546
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)