Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0147
         (789 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   3.5  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          24   4.7  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          24   4.7  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          24   4.7  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   4.7  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           23   8.1  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 257 TINLPKIPQRHIFTEIP*TSTYISVHL 177
           T + P  P R  FTE+P T   +  HL
Sbjct: 793 TPDKPDFPYRKEFTELPDTIELVDAHL 819


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 625 NFTSDESASKNSFKPKNYRLILVIKFNWTR*QIFWVETCYN 503
           ++  DE+ SK       Y +   I  NW   +  W  T YN
Sbjct: 53  SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 625 NFTSDESASKNSFKPKNYRLILVIKFNWTR*QIFWVETCYN 503
           ++  DE+ SK       Y +   I  NW   +  W  T YN
Sbjct: 53  SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 625 NFTSDESASKNSFKPKNYRLILVIKFNWTR*QIFWVETCYN 503
           ++  DE+ SK       Y +   I  NW   +  W  T YN
Sbjct: 53  SYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 136 CYTYLF*CIYM*LYKCTDMYVLVHGIS 216
           CYT+ F C+Y+       +Y L+  IS
Sbjct: 229 CYTFTFICLYLFFIITLSIYGLMSQIS 255


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -3

Query: 622 FTSDESASKNSFKPKNYRLILVIKFNWTR*QIFWVETCYN 503
           +  DE+ SK       Y +   I  NW   +  W  T YN
Sbjct: 54  YVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYN 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 821,689
Number of Sequences: 2352
Number of extensions: 17655
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)